RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PSMD4P55036 377 aaKnown RBP7.46□□□□□ -1.21
CHD6-201ENST00000309279 SNTA1Q13424 505 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 RUNDC3AQ59EK9 446 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 YIF1BQ5BJH7 314 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 ZBTB37Q5TC79 503 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 CXorf67Q86X51 503 aaPredicted RBP7.46□□□□□ -1.21
CHD6-201ENST00000309279 RNF130Q86XS8 419 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 COX18Q8N8Q8 333 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 TMEM178AQ8NBL3 297 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 CCDC197Q8NCU1 140 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 CHDHQ8NE62 594 aaPredicted RBP7.46□□□□□ -1.21
CHD6-201ENST00000309279 OR52N2Q8NGI0 321 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 OR5D16Q8NGK9 328 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 SPPL2AQ8TCT8 520 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 CDS1Q92903 461 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 RAB1CQ92928 201 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 TMEM125Q96AQ2 219 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 CMTM5Q96DZ9 223 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 AURKBQ96GD4 344 aaPredicted RBP7.46□□□□□ -1.21
CHD6-201ENST00000309279 SLC41A3Q96GZ6 507 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 MS4A3Q96HJ5 214 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.21
CHD6-201ENST00000309279 PRRC1Q96M27 445 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 C5orf34Q96MH7 638 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 ZNF48Q96MX3 618 aaPredicted RBP7.46□□□□□ -1.21
CHD6-201ENST00000309279 FOXN4Q96NZ1 517 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 WDFY2Q96P53 400 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 ADOQ96SZ5 270 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 PIGQQ9BRB3 760 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 HES7Q9BYE0 225 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 OR51I1Q9H343 314 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 SMURF2Q9HAU4 748 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 PROK2Q9HC23 129 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 RPH3ALQ9UNE2 315 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 ADAM18Q9Y3Q7 739 aa7.46□□□□□ -1.21
CHD6-201ENST00000309279 TRBV2A0A0J9YWF9 115 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 PRAMEF27A3QJZ7 478 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 A8MZ25 164 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 KLRC4-KLRK1H3BQV0 150 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 FXYD1O00168 92 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 OXSR1O95747 527 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 LPLP06858 475 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 NGFRP08138 427 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 OR12D1P0DN82 309 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 CCL3P10147 92 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 PEPDP12955 493 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 COX4I1P13073 169 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 GABRB1P18505 474 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 CNR1P21554 472 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 MSR1P21757 451 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 PPIBP23284 216 aaKnown RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 IL12BP29460 328 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 MSX2P35548 267 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 POU6F2P78424 691 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 NFATC3Q12968 1075 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 RGNQ15493 299 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 TRMT5Q32P41 509 aaKnown RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 ARHGAP11BQ3KRB8 267 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 NRN1LQ496H8 165 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 TMEM201Q5SNT2 666 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 REP15Q6BDI9 236 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 TNFAIP8L2Q6P589 184 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 TMEM88Q6PEY1 159 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 VASH1Q7L8A9 365 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 DHDDSQ86SQ9 333 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 CYP4Z1Q86W10 505 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 TIGD4Q8IY51 512 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 FITM2Q8N6M3 262 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 OR5M3Q8NGP4 307 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 LRRC58Q96CX6 371 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 OTUB1Q96FW1 271 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 SDF2Q99470 211 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 G6PC3Q9BUM1 346 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 ANGPTL4Q9BY76 406 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 PRRG3Q9BZD7 231 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 C19orf12Q9NSK7 152 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 DEPPQ9NTK1 212 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 EXD2Q9NVH0 621 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 THUMPD1Q9NXG2 353 aaKnown RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 CGGBP1Q9UFW8 167 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 WARS2Q9UGM6 360 aaKnown RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 KLF13Q9Y2Y9 288 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 RP1L1Q8IWN7 2480 aaPredicted RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 SVILO95425 2214 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 PCNX3Q9H6A9 2034 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 FREM3P0C091 2139 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 A0A096LPE4 126 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 A0A1W2PPZ6 126 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 NPIPB9F8W1W9 429 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 ADAM10O14672 748 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 ITGB1BP1O14713 200 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 SUV39H1O43463 412 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 AKAP8O43823 692 aaKnown RBP7.45□□□□□ -1.22
CHD6-201ENST00000309279 FADS1O60427 444 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 DHFRP00374 187 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 MBP02144 154 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 LCATP04180 440 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 P04436 131 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 CHRM2P08172 466 aa7.45□□□□□ -1.22
CHD6-201ENST00000309279 CYP4B1P13584 511 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms