RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TEKQ02763 1124 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 TRAF4Q9BUZ4 470 aaPredicted RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 HDAC8Q9BY41 377 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 PLEKHA1Q9HB21 404 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 TTC28Q96AY4 2481 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 ARRDC5A6NEK1 342 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 OR2AT4A6NND4 320 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 KDM4EB2RXH2 506 aaPredicted RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 RGS11O94810 467 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 PGAM2P15259 253 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 PSMB1P20618 241 aaKnown RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 RBMS1P29558 406 aaKnown RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 GPR85P60893 370 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 KIR2DS3Q14952 304 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 CDNFQ49AH0 187 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 MCATQ8IVS2 390 aaKnown RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 PLPP7Q8NBV4 271 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 SLC37A2Q8TED4 501 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 NPRL2Q8WTW4 380 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 TMEM41AQ96HV5 264 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 LINC00615Q96LM1 132 aaPredicted RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 TCEAL2Q9H3H9 227 aaPredicted RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 COLQQ9Y215 455 aaPredicted RBP12.91□□□□□ -0.34
SDC2-201ENST00000302190 CELSR3Q9NYQ7 3312 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 DOCK9Q9BZ29 2069 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 A0A1W2PPV9 198 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 RP2O75695 350 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 SEMA4FO95754 770 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 GPANK1O95872 356 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 NRG3P56975 720 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 TRAM1Q15629 374 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 DUSP6Q16828 381 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 AADACL4Q5VUY2 407 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 SHEQ5VZ18 495 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 NT5DC2Q9H857 520 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 CMC2Q9NRP2 79 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 OBSL1O75147 1896 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 IGKV1-8A0A0C4DH67 115 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 CPED1A4D0V7 1026 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 C4orf51C9J302 202 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 IMPA2O14732 288 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 PEX14O75381 377 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 UBL3O95164 117 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 CYB5AP00167 134 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 AKR1C4P17516 323 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 SRMP19623 302 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 DCTDP32321 178 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 SLC6A9P48067 706 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 DEFB133Q30KQ1 61 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 OR13H1Q8NG92 308 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 OR52B4Q8NGK2 314 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 BRIX1Q8TDN6 353 aaKnown RBP12.9□□□□□ -0.34
SDC2-201ENST00000302190 MARC2Q969Z3 335 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 MYADMQ96S97 322 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 C19orf43Q9BQ61 176 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 USB1Q9BQ65 265 aaKnown RBP12.9□□□□□ -0.34
SDC2-201ENST00000302190 G6PC3Q9BUM1 346 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 TAS2R3Q9NYW6 316 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 MRTO4Q9UKD2 239 aaKnown RBP12.9□□□□□ -0.34
SDC2-201ENST00000302190 FBXL21Q9UKT6 434 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 TRAPPC4Q9Y296 219 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 LILRB5O75023 590 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 GP1BBP13224 206 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 ST6GAL1P15907 406 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 TFF2Q03403 129 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 DOC2BQ14184 412 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.9□□□□□ -0.341e-9■■□□□ 11.9
SDC2-201ENST00000302190 LIPNQ5VXI9 398 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 LRRC69Q6ZNQ3 347 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 NUP54Q7Z3B4 507 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 CMTM4Q8IZR5 234 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 FAM160A2Q8N612 972 aaPredicted RBP12.9□□□□□ -0.34
SDC2-201ENST00000302190 OR10Z1Q8NGY1 313 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 WDR34Q96EX3 536 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 MAP3K3Q99759 626 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 SLC6A15Q9H2J7 730 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 GMEB2Q9UKD1 530 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 DHDHQ9UQ10 334 aa12.9□□□□□ -0.34
SDC2-201ENST00000302190 SHISA3A0PJX4 238 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 NPIPB8E9PQR5 432 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 AHSA1O95433 338 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.35
SDC2-201ENST00000302190 CLDN20P56880 219 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 VN1R4Q7Z5H5 301 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 OR56B4Q8NH76 319 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 FAM83CQ9BQN1 747 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 NUDT22Q9BRQ3 303 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 KIR3DX1Q9H7L2 352 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 MED17Q9NVC6 651 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 NCDNQ9UBB6 729 aa12.9□□□□□ -0.35
SDC2-201ENST00000302190 HEATR5BQ9P2D3 2071 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 SERTM1A2A2V5 107 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 F5H0A9 414 aaPredicted RBP12.89□□□□□ -0.35
SDC2-201ENST00000302190 PPM1BO75688 479 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 C21orf58P58505 322 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 PLCXD2Q0VAA5 305 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 POU4F2Q12837 409 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms