RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TSPAN32Q96QS1 320 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 SLC6A15Q9H2J7 730 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 SCN3BQ9NY72 215 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 B3GAT1Q9P2W7 334 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 PSORS1C1Q9UIG5 152 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 KLHL21Q9UJP4 597 aa22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 ZNF346Q9UL40 294 aaKnown RBP22.07■■□□□ 1.12
GTF2A1-201ENST00000298173 CACNA1GO43497 2377 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 A0A1W2PNV4 684 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 ZNF814B7Z6K7 855 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 IGHMP01871 453 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 ITGB2P05107 769 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 SLC15A1P46059 708 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 LHX2P50458 406 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 AGFG1P52594 562 aaKnown RBP22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 NUDT6P53370 316 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 CDH15P55291 814 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 CSNK2A1P68400 391 aaPredicted RBP22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 APOFQ13790 326 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 NXNL2Q5VZ03 156 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 GPR139Q6DWJ6 353 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 PXKQ7Z7A4 578 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 NPEPL1Q8NDH3 523 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 OR52E2Q8NGJ4 325 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 OR4K13Q8NH42 304 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 GGHQ92820 318 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 RHNO1Q9BSD3 238 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 TXNIPQ9H3M7 391 aa22.06■■□□□ 1.12
GTF2A1-201ENST00000298173 LOC102725191A0A1B0GVB3 256 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 MED19A0JLT2 244 aaPredicted RBP22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 AQP7P3A6NL99 342 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 TRIM64CA6NLI5 447 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 RIIAD1A6NNX1 92 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 CLCA1A8K7I4 914 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 PTGES3LE9PB15 166 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 TNFSF11O14788 317 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 DNPH1O43598 174 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 FAM20BO75063 409 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 IFNGP01579 166 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 HLA-DOBP13765 273 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 POU3F2P20265 443 aaPredicted RBP22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 RAC3P60763 192 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 CRMP1Q14194 572 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 SLC37A3Q8NCC5 494 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 RASD2Q96D21 266 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 GRHPRQ9UBQ7 328 aa22.05■■□□□ 1.12
GTF2A1-201ENST00000298173 NPIPB13A6NJU9 1138 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 FAM183AA6NL82 134 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 NPIPB4C9JG80 1138 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 PRODHO43272 600 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 EIF1BO60739 113 aaKnown RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 HTR1AP08908 422 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 ZNF3P17036 446 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 CLDN18P56856 261 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 BCL2A1Q16548 175 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 ACKR1Q16570 336 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 PLBD1Q6P4A8 553 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 TMEM154Q6P9G4 183 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 CXXC5Q7LFL8 322 aaKnown RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 ZNF540Q8NDQ6 660 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 NEIL3Q8TAT5 605 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 SIGLEC11Q96RL6 698 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 HCAR1Q9BXC0 346 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 DEFB127Q9H1M4 99 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 SCOCQ9UIL1 159 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 LIPGQ9Y5X9 500 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 TEX13CA0A0J9YWL9 993 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 EIF1AYO14602 144 aaKnown RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 ZNF708P17019 499 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 KLK2P20151 261 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 CDKN2AP42771 156 aaKnown RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 RPL27P61353 136 aaKnown RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 CXADRP78310 365 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 RPUSD3Q6P087 351 aaKnown RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 ARIH2OSQ8N7S6 290 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 LSM14AQ8ND56 463 aaKnown RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 BBS1Q8NFJ9 593 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 OR2V1Q8NHB1 315 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 IPCEF1Q8WWN9 437 aaPredicted RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 SRXN1Q9BYN0 137 aa22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 RPL36Q9Y3U8 105 aaKnown RBP22.04■■□□□ 1.12
GTF2A1-201ENST00000298173 ACTL6AO96019 429 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 IGHG3P01860 377 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 CARD18P57730 90 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 BLMHQ13867 455 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 MESTQ5EB52 335 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 ARMC4Q5T2S8 1044 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 HBMQ6B0K9 141 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 VASNQ6EMK4 673 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 CYB561A3Q8NBI2 242 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 SDR9C7Q8NEX9 313 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 ZNF519Q8TB69 540 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 ABTB1Q969K4 478 aaPredicted RBP22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 TAAR6Q96RI8 345 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 NMNAT3Q96T66 252 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 NMNAT2Q9BZQ4 307 aa22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 MRPS18AQ9NVS2 196 aaKnown RBP22.03■■□□□ 1.12
GTF2A1-201ENST00000298173 A0A087WXM4 84 aa22.02■■□□□ 1.12
GTF2A1-201ENST00000298173 OR6C68A6NDL8 312 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms