RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TEX13CA0A0J9YWL9 993 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 C12orf71A8MTZ7 269 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 PRR33A8MZF0 331 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 TP53I11O14683 189 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 OTX2P32243 289 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 DLX5P56178 289 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
C9orf3-202ENST00000297979 POU4F2Q12837 409 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 SOWAHCQ53LP3 525 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-202ENST00000297979 HES3Q5TGS1 186 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 OPN5Q6U736 354 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 FAM122BQ7Z309 247 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 TMEM99Q8N816 258 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 NPEPL1Q8NDH3 523 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 TM9SF4Q92544 642 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 NMNAT3Q96T66 252 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 ADGRL4Q9HBW9 690 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 INPP5EQ9NRR6 644 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 FOXJ2Q9P0K8 574 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 FARSAQ9Y285 508 aaKnown RBP12.91□□□□□ -0.34
C9orf3-202ENST00000297979 HRH3Q9Y5N1 445 aa12.91□□□□□ -0.34
C9orf3-202ENST00000297979 IMPA2O14732 288 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 PSMA1P25786 263 aaKnown RBP12.9□□□□□ -0.34
C9orf3-202ENST00000297979 SDHAP31040 664 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 CASP3P42574 277 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 SERPINB10P48595 397 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 ARSKQ6UWY0 536 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 ADCK1Q86TW2 530 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 Q96M85 177 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 STUB1Q9UNE7 303 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 CHCHD2Q9Y6H1 151 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-202ENST00000297979 GPX5O75715 221 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 SERPINI2O75830 405 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 AHSA1O95433 338 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 F13BP05160 661 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 MRPL3P09001 348 aaKnown RBP12.9□□□□□ -0.34
C9orf3-202ENST00000297979 SBK2P0C263 348 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 APOBEC1P41238 236 aaKnown RBP12.9□□□□□ -0.34
C9orf3-202ENST00000297979 ZNF41P51814 821 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-202ENST00000297979 LGALS3BPQ08380 585 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 LCN1P1Q5VSP4 162 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 OR10H4Q8NGA5 316 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 ASB15Q8WXK1 588 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 UFD1Q92890 307 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 SLC25A36Q96CQ1 311 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 DNAJA3Q96EY1 480 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 DDOQ99489 341 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 ASPNQ9BXN1 380 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 RNF167Q9H6Y7 350 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 CPNE5Q9HCH3 593 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 PARD6AQ9NPB6 346 aa12.9□□□□□ -0.34
C9orf3-202ENST00000297979 CAB39Q9Y376 341 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-202ENST00000297979 CPAMD8Q8IZJ3 1885 aa12.9□□□□□ -0.35
C9orf3-202ENST00000297979 DAPL1A0PJW8 107 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 TXNDC12O95881 172 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 TMEM11P17152 192 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 SSR4P51571 173 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 RPS15P62841 145 aaKnown RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 FOXF1Q12946 379 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 TPBGQ13641 420 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 TRIP6Q15654 476 aaKnown RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF124Q15973 351 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 SGCBQ16585 318 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF322Q6U7Q0 402 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 IL20RBQ6UXL0 311 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 TMPRSS11AQ6ZMR5 421 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 GDPGP1Q6ZNW5 385 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 SPRYD4Q8WW59 207 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 TBX5Q99593 518 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ALG8Q9BVK2 526 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 OR11A1Q9GZK7 315 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 CDCP1Q9H5V8 836 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 NCDNQ9UBB6 729 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 RPH3AQ9Y2J0 694 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 OR6C68A6NDL8 312 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ETV2O00321 342 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 AKAP8O43823 692 aaKnown RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 OR2T1O43869 369 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ACSM1Q08AH1 577 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 GGTLC2Q14390 218 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 Q3ZCU0 254 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 EMC4Q5J8M3 183 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 LEG1Q6P5S2 330 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 OR5J2Q8NH18 312 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ZPLD1Q8TCW7 415 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 SMPDL3BQ92485 455 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 NPAS1Q99742 590 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 NMNAT2Q9BZQ4 307 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 EXOSC4Q9NPD3 245 aaKnown RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 GRHPRQ9UBQ7 328 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 SDK2Q58EX2 2172 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ST8SIA5O15466 376 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 HPP00738 406 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ICAM2P13598 275 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 CRYBB2P43320 205 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ENTPD1P49961 510 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ACTC1P68032 377 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ACTA1P68133 377 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms