RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 OR51S1Q8NGJ8 323 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 RAB3CQ96E17 227 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 NKX6-2Q9C056 277 aaPredicted RBP13.14□□□□□ -0.31
COL1A2-201ENST00000297268 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 RARRES3Q9UL19 164 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 A0A1B0GTL3 188 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 H0YGG7 62 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 GABARAPH6UMI1 98 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 SULT2B1O00204 365 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 PLPP1O14494 284 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 DPY19L2P2Q6ZN68 376 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 Q6ZSR6 202 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 OR56B1Q8NGI3 324 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 OR52I2Q8NH67 350 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 POC1BQ8TC44 478 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 CHRDQ9H2X0 955 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 ZMAT3Q9HA38 289 aaKnown RBP13.14□□□□□ -0.31
COL1A2-201ENST00000297268 C19orf12Q9NSK7 152 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 B4GALT7Q9UBV7 327 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 CIB4A0PJX0 185 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 ZC3H12DA2A288 527 aaKnown RBP13.14□□□□□ -0.31
COL1A2-201ENST00000297268 ZNF264O43296 627 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 DOK2O60496 412 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 LGI1O95970 557 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 OPN1LWP04000 364 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 GABRB1P18505 474 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 BMPR1AP36894 532 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 CD79BP40259 229 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 PER3P56645 1201 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 SLC48A1Q6P1K1 146 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 TMEM99Q8N816 258 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 TJP1Q07157 1748 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 CSNK1A1P48729 337 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 ESPNLQ6ZVH7 1005 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 OVCH1Q7RTY7 1134 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 TEAD3Q99594 435 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 TMEM59Q9BXS4 323 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 KIF25Q9UIL4 384 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 F3P13726 295 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 CNR1P21554 472 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 TACR3P29371 465 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 MFGE8Q08431 387 aaPredicted RBP13.14□□□□□ -0.31
COL1A2-201ENST00000297268 SSX2Q16385 188 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 OR5M10Q6IEU7 315 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 USP51Q70EK9 711 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 FAM57BQ71RH2 274 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 OR14L1PQ8NHC6 308 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 FAM213BQ8TBF2 198 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 PDXPQ96GD0 296 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 SLC25A21Q9BQT8 299 aaPredicted RBP13.14□□□□□ -0.31
COL1A2-201ENST00000297268 SELENOIQ9C0D9 397 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 SMCO4Q9NRQ5 59 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 NCDNQ9UBB6 729 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 SCML1Q9UN30 329 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 LOC100289279A0A1B0GTE1 492 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SERINC4A6NH21 518 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SCO1O75880 301 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SERPINA7P05543 415 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 DBHP09172 617 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 TGM1P22735 817 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 MSX1P28360 303 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 EVX1P49640 407 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 ACSM1Q08AH1 577 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SHDQ96IW2 340 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SLC22A12Q96S37 553 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SRRQ9GZT4 340 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 RBM38Q9H0Z9 239 aaKnown RBP13.13□□□□□ -0.31
COL1A2-201ENST00000297268 PIGMQ9H3S5 423 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 TMEM100Q9NV29 134 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 RNF186Q9NXI6 227 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 A0A087WUU8 490 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 HMGN4O00479 90 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 P04436 131 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 RPS18P62269 152 aaKnown RBP13.13□□□□□ -0.31
COL1A2-201ENST00000297268 FABP5Q01469 135 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 ZNF385BQ569K4 471 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 MFSD12Q6NUT3 480 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SLC16A11Q8NCK7 471 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 RSPRY1Q96DX4 576 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 LIN37Q96GY3 246 aaPredicted RBP13.13□□□□□ -0.31
COL1A2-201ENST00000297268 RADILQ96JH8 1075 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 CMSS1Q9BQ75 279 aaKnown RBP13.13□□□□□ -0.31
COL1A2-201ENST00000297268 ULBP3Q9BZM4 244 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SLCO5A1Q9H2Y9 848 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 HSFX1Q9UBD0 423 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 TMEM202A6NGA9 273 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 GJE1A6NN92 205 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 EFNA3P52797 238 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 EXOSC2Q13868 293 aaKnown RBP13.13□□□□□ -0.31
COL1A2-201ENST00000297268 XAF1Q6GPH4 301 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 OR10K2Q6IF99 312 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 NLRC3Q7RTR2 1065 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 MRPL41Q8IXM3 137 aaKnown RBP13.13□□□□□ -0.31
COL1A2-201ENST00000297268 NUDT22Q9BRQ3 303 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 ATP13A2Q9NQ11 1180 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SBK2P0C263 348 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 PRSS36Q5K4E3 855 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 MMP21Q8N119 569 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms