RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 LDLRAD1Q5T700 205 aa14.29□□□□□ -0.12
FNDC1-201ENST00000297267 LINC01599Q8WXQ3 324 aa14.29□□□□□ -0.12
FNDC1-201ENST00000297267 SORCS2Q96PQ0 1159 aa14.29□□□□□ -0.12
FNDC1-201ENST00000297267 C20orf85Q9H1P6 137 aa14.29□□□□□ -0.12
FNDC1-201ENST00000297267 C8orf33Q9H7E9 229 aaPredicted RBP14.29□□□□□ -0.12
FNDC1-201ENST00000297267 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.28□□□□□ -0.12
FNDC1-201ENST00000297267 UGDHO60701 494 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 ARNTP27540 789 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 TAS2R20P59543 309 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 ZMAT1Q5H9K5 638 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 TCTE1Q5JU00 501 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 CYS1Q717R9 158 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 CNTN4Q8IWV2 1026 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 CMTM1Q8IZ96 169 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 MFSD9Q8NBP5 474 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 USB1Q9BQ65 265 aaKnown RBP14.28□□□□□ -0.12
FNDC1-201ENST00000297267 MFRPQ9BY79 579 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 GNB4Q9HAV0 340 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 HRASLSQ9HDD0 168 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 USP3Q9Y6I4 520 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 A0A1B0GTL3 188 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 HNRNPFP52597 415 aaKnown RBP14.28□□□□□ -0.12
FNDC1-201ENST00000297267 SFXN4Q6P4A7 337 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 CCDC71LQ8N9Z2 235 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 GPR119Q8TDV5 335 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 ACOT11Q8WXI4 607 aaPredicted RBP14.28□□□□□ -0.12
FNDC1-201ENST00000297267 PPP1R14DQ9NXH3 145 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 GPR176Q14439 515 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 TIMM29Q9BSF4 260 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 ADAMTS5Q9UNA0 930 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 MBLAC1A4D2B0 266 aaPredicted RBP14.28□□□□□ -0.12
FNDC1-201ENST00000297267 ZNF217O75362 1048 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 PDE7AQ13946 482 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 GALEQ14376 348 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 SSX9Q7RTT3 188 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 SLC16A14Q7RTX9 510 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 DCXRQ7Z4W1 244 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 MRPL41Q8IXM3 137 aaKnown RBP14.28□□□□□ -0.12
FNDC1-201ENST00000297267 SLC16A11Q8NCK7 471 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 GAB3Q8WWW8 586 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 TBC1D20Q96BZ9 403 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 ELP4Q96EB1 424 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 NRTNQ99748 197 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 TMPRSS11EQ9UL52 423 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 TRIP11Q15643 1979 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 HOXB9P17482 250 aaPredicted RBP14.28□□□□□ -0.12
FNDC1-201ENST00000297267 SLC1A3P43003 542 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 TGFBR3Q03167 851 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 FOXB2Q5VYV0 432 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 GPR173Q9NS66 373 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 GNG13Q9P2W3 67 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 DUSP13Q9UII6 198 aa14.28□□□□□ -0.12
FNDC1-201ENST00000297267 COA3Q9Y2R0 106 aaPredicted RBP14.28□□□□□ -0.12
FNDC1-201ENST00000297267 HMX2A2RU54 273 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 OR6C76A6NM76 312 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 TP53P04637 393 aaPredicted RBP14.27□□□□□ -0.12
FNDC1-201ENST00000297267 NFYBP25208 207 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 RPS19P39019 145 aaKnown RBP14.27□□□□□ -0.12
FNDC1-201ENST00000297267 KIAA1024LP59773 190 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 FOXK2Q01167 660 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 SYT3Q9BQG1 590 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 HHATLQ9HCP6 504 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 A0A087WV62 115 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 FITM1A5D6W6 292 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 TRAPPC2LH3BP13 241 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 LINC01565O15544 149 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 ZNF749O43361 778 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 AK1P00568 194 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 POLR2HP52434 150 aaKnown RBP14.27□□□□□ -0.12
FNDC1-201ENST00000297267 ELLP55199 621 aaPredicted RBP14.27□□□□□ -0.12
FNDC1-201ENST00000297267 OR8B8Q15620 311 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 FAM189A2Q15884 450 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 B3GNT9Q6UX72 402 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 TMEM99Q8N816 258 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 OR7G2Q8NG99 324 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 AMDHD1Q96NU7 426 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 ISG20L2Q9H9L3 353 aaKnown RBP14.27□□□□□ -0.12
FNDC1-201ENST00000297267 SLC6A20Q9NP91 592 aa14.27□□□□□ -0.12
FNDC1-201ENST00000297267 B4DXG7 233 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 TFAP2AP05549 437 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 CD38P28907 300 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 EFNA3P52797 238 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 BCL2A1Q16548 175 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 PGM2L1Q6PCE3 622 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 ZNF417Q8TAU3 575 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 TSSK2Q96PF2 358 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 CSNK1G1Q9HCP0 422 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 PI3P19957 117 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 BLVRBP30043 206 aaPredicted RBP14.27□□□□□ -0.13
FNDC1-201ENST00000297267 MLLT11Q13015 90 aaPredicted RBP14.27□□□□□ -0.13
FNDC1-201ENST00000297267 TWSG1Q9GZX9 223 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 HOXD1Q9GZZ0 328 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 GFOD1Q9NXC2 390 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 PIGLQ9Y2B2 252 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 LCMT2O60294 686 aaKnown RBP14.27□□□□□ -0.13
FNDC1-201ENST00000297267 PRAMEF4O60810 478 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 METAP1P53582 386 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 PLAC9Q5JTB6 97 aa14.27□□□□□ -0.13
FNDC1-201ENST00000297267 ZNF468Q5VIY5 522 aaPredicted RBP14.27□□□□□ -0.13
FNDC1-201ENST00000297267 MAN2B1O00754 1011 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms