RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 EPHA3P29320 983 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 DVL1P1P54792 670 aaPredicted RBP13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 CCNIQ14094 377 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 DAG1Q14118 895 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 MPP2Q14168 576 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 GTDC1Q4AE62 458 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 UGT2A3Q6UWM9 527 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 RINLQ6ZS11 566 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 CCDC36Q8IYA8 594 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 TMEM123Q8N131 208 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 GPR137CQ8N3F9 429 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 PIK3C3Q8NEB9 887 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 IL17RDQ8NFM7 739 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF417Q8TAU3 575 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 VPS33AQ96AX1 596 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 OXGR1Q96P68 337 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 OR2M2Q96R28 347 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF587Q96SQ5 575 aaPredicted RBP13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 TPK1Q9H3S4 243 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 WDR55Q9H6Y2 383 aaPredicted RBP13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 THUMPD1Q9NXG2 353 aaKnown RBP13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF232Q9UNY5 417 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 USP22Q9UPT9 525 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 IFT52Q9Y366 437 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 A0A0G2JPF8 293 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 HNRNPCL2B2RXH8 293 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 HNRNPCL3B7ZW38 293 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 AIM2O14862 343 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 AKAP8O43823 692 aaKnown RBP13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 HNRNPCL1O60812 293 aaKnown RBP13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 ADRA2AP08913 450 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 HNRNPCL4P0DMR1 293 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 IDO1P14902 403 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 CAPZA2P47755 286 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 HOXC5Q00444 222 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 IL1RL1Q01638 556 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 C1DQ13901 141 aaKnown RBP13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 PDCD4Q53EL6 469 aaKnown RBP13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF311Q5JNZ3 666 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 FAM69AQ5T7M9 428 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 MREGQ8N565 214 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 C12orf10Q9HB07 376 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 CMAHPQ9Y471 501 aa13.78□□□□□ -0.2
TMEM41A-201ENST00000296254 TMEM247A6NEH6 219 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 LYNX1G3V0Z9 82 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 M0R233 179 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 HDAC3O15379 428 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 OR2T1O43869 369 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 SLC22A3O75751 556 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 ANP32DO95626 131 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 LYNX1P0DP58 116 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 NR4A1P22736 598 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 EVX1P49640 407 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 MSMPQ1L6U9 139 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 C5orf46Q6UWT4 87 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 MSANTD1Q6ZTZ1 278 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 ADPRHL1Q8NDY3 354 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 SEMA6DQ8NFY4 1073 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 TAAR8Q969N4 342 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 MRPL24Q96A35 216 aaKnown RBP13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 MRPL37Q9BZE1 423 aaKnown RBP13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 BCL2L10Q9HD36 194 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 B3GNT2Q9NY97 397 aa13.77□□□□□ -0.21
TMEM41A-201ENST00000296254 IGKV1D-42A0A075B6H8 117 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 LOC102725191A0A1B0GVB3 256 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 TRPC5OSA6NMA1 111 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 B4DSR2 109 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 M0R3G1 203 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 SYNGR3O43761 229 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 HLA-HP01893 362 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 NUDT7P0C024 238 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 HTR2AP28223 471 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 GRPRP30550 384 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 GSG1Q2KHT4 349 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 TNFAIP8L3Q5GJ75 292 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 ELFN2Q5R3F8 820 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 PHYHD1Q5SRE7 291 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 WDR93Q6P2C0 686 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 DEF8Q6ZN54 512 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 GLCCI1Q86VQ1 547 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 LSMEM1Q8N8F7 131 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 SLC38A4Q969I6 547 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 MAL2Q969L2 176 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 MS4A3Q96HJ5 214 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 ITCHQ96J02 903 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 MAELQ96JY0 434 aaKnown RBP13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 RMND5AQ9H871 391 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 A4GALTQ9NPC4 353 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 SDR39U1Q9NRG7 319 aaPredicted RBP13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 ZIM2Q9NZV7 527 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 KLHL14Q9P2G3 628 aa13.76□□□□□ -0.21
TMEM41A-201ENST00000296254 TRAV36DV7A0A075B6V5 113 aa13.75□□□□□ -0.21
TMEM41A-201ENST00000296254 A0A0A6YYJ9 748 aa13.75□□□□□ -0.21
TMEM41A-201ENST00000296254 A0A1B0GWA3 101 aa13.75□□□□□ -0.21
TMEM41A-201ENST00000296254 SLCO1B7G3V0H7 640 aa13.75□□□□□ -0.21
TMEM41A-201ENST00000296254 SNNO75324 88 aaPredicted RBP13.75□□□□□ -0.21
TMEM41A-201ENST00000296254 BMP2P12643 396 aa13.75□□□□□ -0.21
TMEM41A-201ENST00000296254 ZNF14P17017 642 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms