RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 OR2T4Q8NH00 348 aa21.75■■□□□ 1.07
TRIM54-201ENST00000296098 MFRPQ9BY79 579 aa21.75■■□□□ 1.07
TRIM54-201ENST00000296098 TGIF2Q9GZN2 237 aa21.75■■□□□ 1.07
TRIM54-201ENST00000296098 MOV10Q9HCE1 1003 aaKnown RBP21.75■■□□□ 1.07
TRIM54-201ENST00000296098 SLC22A11Q9NSA0 550 aa21.75■■□□□ 1.07
TRIM54-201ENST00000296098 A0A0B4J293 547 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 ZNF879B4DU55 563 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 PSMD9O00233 223 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 RENP00797 406 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 NCCRP1Q6ZVX7 275 aaPredicted RBP21.74■■□□□ 1.07
TRIM54-201ENST00000296098 OVCH1Q7RTY7 1134 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 DUSP18Q8NEJ0 188 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 PHYHIPQ92561 330 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 ABRACLQ9P1F3 81 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 TEKT2Q9UIF3 430 aa21.74■■□□□ 1.07
TRIM54-201ENST00000296098 ATXN7L1Q9ULK2 861 aaPredicted RBP21.74■■□□□ 1.07
TRIM54-201ENST00000296098 IDSB3KWA1 339 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 DCTN6O00399 190 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 FADS1O60427 444 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 EPXP11678 715 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 ATF1P18846 271 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 NR4A2P43354 598 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 P2RX1P51575 399 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 UNQ9370/PRO34162Q6UXP9 181 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 TMPRSS9Q7Z410 1059 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 TIGD4Q8IY51 512 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 STT3BQ8TCJ2 826 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 RFT1Q96AA3 541 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 WACQ9BTA9 647 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 NEK6Q9HC98 313 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 SRA1Q9HD15 236 aaKnown RBP21.73■■□□□ 1.07
TRIM54-201ENST00000296098 KLHDC2Q9Y2U9 406 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 RP1P56715 2156 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 FAM240BA0A1B0GVZ2 78 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 TMEM72A0PK05 275 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 SEC16AO15027 2179 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 FZD7O75084 574 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 FAM157BP0CG42 384 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 EPHA8P29322 1005 aaPredicted RBP21.73■■□□□ 1.07
TRIM54-201ENST00000296098 POLR2HP52434 150 aaKnown RBP21.73■■□□□ 1.07
TRIM54-201ENST00000296098 TBRG1Q3YBR2 411 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 CEP78Q5JTW2 689 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 MAMDC2Q7Z304 686 aaPredicted RBP21.73■■□□□ 1.07
TRIM54-201ENST00000296098 RABEPKQ7Z6M1 372 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 SYT9Q86SS6 491 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 CDC20BQ86Y33 519 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 ST6GAL2Q96JF0 529 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 ZCCHC4Q9H5U6 513 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 ZNF281Q9Y2X9 895 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 SIT1Q9Y3P8 196 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 USP34Q70CQ2 3546 aa21.73■■□□□ 1.07
TRIM54-201ENST00000296098 IGHV3-20A0A0C4DH32 117 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 MT-ATP6P00846 226 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 TACSTD2P09758 323 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 FOXL2P58012 376 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 NANOS3P60323 173 aaKnown RBP21.72■■□□□ 1.07
TRIM54-201ENST00000296098 C1QL3Q5VWW1 255 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 LYSMD4Q5XG99 296 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 KCTD20Q7Z5Y7 419 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 GLCCI1Q86VQ1 547 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 DTX3Q8N9I9 347 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 OR5H6Q8NGV6 325 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 TRIM63Q969Q1 353 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 TNRC18O15417 2968 aaPredicted RBP21.72■■□□□ 1.07
TRIM54-201ENST00000296098 OR6C70A6NIJ9 312 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 SUSD5O60279 629 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 OR8G3PP0DMU2 310 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 SNRPBP14678 240 aaKnown RBP21.72■■□□□ 1.07
TRIM54-201ENST00000296098 RNF4P78317 190 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 ACY1Q03154 408 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 YIF1BQ5BJH7 314 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 PYHIN1Q6K0P9 492 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 ZNF574Q6ZN55 896 aaPredicted RBP21.72■■□□□ 1.07
TRIM54-201ENST00000296098 OR6V1Q8N148 313 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 DNAJA3Q96EY1 480 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 ADAD1Q96M93 576 aaKnown RBP21.72■■□□□ 1.07
TRIM54-201ENST00000296098 THAP7Q9BT49 309 aaPredicted RBP21.72■■□□□ 1.07
TRIM54-201ENST00000296098 PTDSS2Q9BVG9 487 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 NOX4Q9NPH5 578 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 NLKQ9UBE8 527 aa21.72■■□□□ 1.07
TRIM54-201ENST00000296098 TMED7-TICAM2A0A0A6YYA0 188 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 A0A1B0GVC2 190 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 A6NIN4 97 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 AGRPO00253 132 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 PNLIPP16233 465 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 UBASH3BQ8TF42 649 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 SLC7A6Q92536 515 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 RNF166Q96A37 237 aaPredicted RBP21.71■■□□□ 1.07
TRIM54-201ENST00000296098 DUSP23Q9BVJ7 150 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 SYT4Q9H2B2 425 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 BRD7Q9NPI1 651 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 TAS2R5Q9NYW4 299 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 TMED7Q9Y3B3 224 aa21.71■■□□□ 1.07
TRIM54-201ENST00000296098 AK6Q9Y3D8 172 aaKnown RBP21.71■■□□□ 1.07
TRIM54-201ENST00000296098 IGLV3-12A0A075B6K2 115 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 CPED1A4D0V7 1026 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 TVP23AA6NH52 213 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 PRKCAP17252 672 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 DHPSP49366 369 aaPredicted RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 NR0B2Q15466 257 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms