RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 ZNF587Q96SQ5 575 aaPredicted RBP17.02■□□□□ 0.32
CXCL3-201ENST00000296026 CHODLQ9H9P2 273 aa17.02■□□□□ 0.32
CXCL3-201ENST00000296026 GPR35Q9HC97 309 aa17.02■□□□□ 0.32
CXCL3-201ENST00000296026 SLC25A37Q9NYZ2 338 aa17.02■□□□□ 0.32
CXCL3-201ENST00000296026 KCNS2Q9ULS6 477 aa17.02■□□□□ 0.32
CXCL3-201ENST00000296026 CUBNO60494 3623 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 IGHV4-61A0A0C4DH41 118 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 LOC100289279A0A1B0GTE1 492 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 A0A1B0GWA3 101 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 SLC35F4A4IF30 521 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 CBLP22681 906 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 HTR2AP28223 471 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 PPOXP50336 477 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 IDH3GP51553 393 aaPredicted RBP17.01■□□□□ 0.31
CXCL3-201ENST00000296026 STX1BP61266 288 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 IL1RL1Q01638 556 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 HGFACQ04756 655 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 CEACAM16Q2WEN9 425 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 IQCCQ4KMZ1 466 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 ALG10BQ5I7T1 473 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 EPGNQ6UW88 154 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 H1FNTQ75WM6 255 aaPredicted RBP17.01■□□□□ 0.31
CXCL3-201ENST00000296026 COMTD1Q86VU5 262 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 PIK3C3Q8NEB9 887 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 NFKBIDQ8NI38 313 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 TLCD1Q96CP7 247 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 ZNF837Q96EG3 531 aaPredicted RBP17.01■□□□□ 0.31
CXCL3-201ENST00000296026 RAB1BQ9H0U4 201 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 CRLF2Q9HC73 371 aa17.01■□□□□ 0.31
CXCL3-201ENST00000296026 STAB1Q9NY15 2570 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 IGKV1D-42A0A075B6H8 117 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 TRAV36DV7A0A075B6V5 113 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 ZNF503-AS2A6NEH8 195 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 ZNF500O60304 480 aaPredicted RBP17■□□□□ 0.31
CXCL3-201ENST00000296026 ARAFP10398 606 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 NPR2P20594 1047 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 THBS4P35443 961 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 ARR3P36575 388 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 NPRL3Q12980 569 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 LRIF1Q5T3J3 769 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 GCNT6Q5T4J0 391 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 IL17RELQ6ZVW7 336 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 NET1Q7Z628 596 aaPredicted RBP17■□□□□ 0.31
CXCL3-201ENST00000296026 MSRB3Q8IXL7 192 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 C10orf111Q8N326 155 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 DNAJA4Q8WW22 397 aaPredicted RBP17■□□□□ 0.31
CXCL3-201ENST00000296026 OR2M2Q96R28 347 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 BPESC1Q9GZL8 116 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 ZNF442Q9H7R0 627 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 TMBIM4Q9HC24 238 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 SLAMF8Q9P0V8 285 aa17■□□□□ 0.31
CXCL3-201ENST00000296026 FBXO9Q9UK97 447 aaPredicted RBP17■□□□□ 0.31
CXCL3-201ENST00000296026 LOC102725191A0A1B0GVB3 256 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 VSTM5A8MXK1 200 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 hCG_2039718K7EN88 272 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 TRAF3IP2O43734 574 aaPredicted RBP16.99■□□□□ 0.31
CXCL3-201ENST00000296026 AKAP8O43823 692 aaKnown RBP16.99■□□□□ 0.31
CXCL3-201ENST00000296026 TPST1O60507 370 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 SEC14L2O76054 403 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 SRD5A1P18405 259 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 CAPZA2P47755 286 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 MRPL19P49406 292 aaKnown RBP16.99■□□□□ 0.31
CXCL3-201ENST00000296026 CDK6Q00534 326 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 GLIPR1L2Q4G1C9 344 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 FAM120AOSQ5T036 256 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 REEP3Q6NUK4 255 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 ULK3Q6PHR2 472 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 DHRS4L2Q6PKH6 230 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 KRT73Q86Y46 540 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 FUNDC1Q8IVP5 155 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 TMEM123Q8N131 208 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 ZNF540Q8NDQ6 660 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 RNF217Q8TC41 542 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 SPATA5L1Q9BVQ7 753 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 TCF7L2Q9NQB0 619 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 KLHL14Q9P2G3 628 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 MALRD1Q5VYJ5 2156 aa16.99■□□□□ 0.31
CXCL3-201ENST00000296026 IGHV2OR16-5A0A0B4J2B6 119 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 ZNF99A8MXY4 864 aaPredicted RBP16.98■□□□□ 0.31
CXCL3-201ENST00000296026 MS4A18H0YCH9 400 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 M0R3G1 203 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 POLR3GO15318 223 aaPredicted RBP16.98■□□□□ 0.31
CXCL3-201ENST00000296026 TGFAP01135 160 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 NQO1P15559 274 aaKnown RBP16.98■□□□□ 0.31
CXCL3-201ENST00000296026 ZNF23P17027 643 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 MS4A18Q3C1V0 323 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 KRTAP24-1Q3LI83 254 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 PHYHD1Q5SRE7 291 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 CARD17Q5XLA6 110 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 FAM91A1Q658Y4 838 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 BLOC1S3Q6QNY0 202 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 SPATA21Q7Z572 469 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 MDP1Q86V88 176 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 UEVLDQ8IX04 471 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 CCDC36Q8IYA8 594 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 ZCCHC24Q8N2G6 241 aaKnown RBP16.98■□□□□ 0.31
CXCL3-201ENST00000296026 SVOPLQ8N434 492 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 ADPRHL1Q8NDY3 354 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 SPDL1Q96EA4 605 aa16.98■□□□□ 0.31
CXCL3-201ENST00000296026 SLC47A1Q96FL8 570 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms