RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 PPICP45877 212 aa14.38□□□□□ -0.11
NCKIPSD-201ENST00000294129 LANCL3Q6ZV70 420 aa14.38□□□□□ -0.11
NCKIPSD-201ENST00000294129 HIST3H2AQ7L7L0 130 aa14.38□□□□□ -0.11
NCKIPSD-201ENST00000294129 HIST1H2ACQ93077 130 aa14.38□□□□□ -0.11
NCKIPSD-201ENST00000294129 TAAR8Q969N4 342 aa14.38□□□□□ -0.11
NCKIPSD-201ENST00000294129 RNF170Q96K19 258 aa14.38□□□□□ -0.11
NCKIPSD-201ENST00000294129 AUNIPQ9H7T9 357 aa14.38□□□□□ -0.11
NCKIPSD-201ENST00000294129 CACNG2Q9Y698 323 aa14.38□□□□□ -0.11
NCKIPSD-201ENST00000294129 C2orf72A6NCS6 295 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 GLCEO94923 617 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 IL33O95760 270 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 HLA-DQA2P01906 255 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 PNMTP11086 282 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 CD53P19397 219 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 CCR6P51684 374 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 RPS4XP62701 263 aaKnown RBP14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 CAMK2BQ13554 666 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 LINC01590Q5TEZ4 76 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 SYS1Q8N2H4 156 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 TOMM5Q8N4H5 51 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 ZNF578Q96N58 590 aaPredicted RBP14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 ZNF285Q96NJ3 590 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 EVA1AQ9H8M9 152 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 FKRPQ9H9S5 495 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 GTF2A1LQ9UNN4 478 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 FREM3P0C091 2139 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 ARPC3O15145 178 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 PIN1P1O15428 100 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 CDC40O60508 579 aaKnown RBP eCLIP14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 RAD1O60671 282 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 GALK2Q01415 458 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 CFHR1Q03591 330 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 PLCXD2Q0VAA5 305 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 CCDC58Q4VC31 144 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 PYHIN1Q6K0P9 492 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 DPY19L4Q7Z388 723 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 ZNF440Q8IYI8 595 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 DNAAF1Q8NEP3 725 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 THEM6Q8WUY1 208 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 SLC46A1Q96NT5 459 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 UBL7Q96S82 380 aaPredicted RBP14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 DDOQ99489 341 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 MARVELD1Q9BSK0 173 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 TBL1XR1Q9BZK7 514 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 TTYH1Q9H313 450 aaPredicted RBP14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 WDR76Q9H967 626 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 NKIRAS2Q9NYR9 191 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 DDAH2O95865 285 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 MT-ND4P03905 459 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 SYPP08247 313 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 PTHLHP12272 177 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 SRMP19623 302 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 BCKDHBP21953 392 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 CXCR1P25024 350 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 PTBP1P26599 531 aaKnown RBP eCLIP14.37□□□□□ -0.114e-6■■■■■ 29.2
NCKIPSD-201ENST00000294129 GIFP27352 417 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 RIN1Q13671 783 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 GGTLC2Q14390 218 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 CLPPQ16740 277 aaPredicted RBP14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 FNDC7Q5VTL7 733 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 LRRC69Q6ZNQ3 347 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 LINGO2Q7L985 606 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 SIAH3Q8IW03 269 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 C9orf40Q8IXQ3 194 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 BEST4Q8NFU0 473 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 PMEPA1Q969W9 287 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 ZC3HAV1LQ96H79 300 aaKnown RBP14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 PHF7Q9BWX1 381 aaPredicted RBP14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 ULBP3Q9BZM4 244 aa14.37□□□□□ -0.11
NCKIPSD-201ENST00000294129 DMDP11532 3685 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 BLACEA4D250 179 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 FBLP22087 321 aaKnown RBP14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 HSD11B2P80365 405 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 LIPNQ5VXI9 398 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 FAM220AQ7Z4H9 259 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 PM20D2Q8IYS1 436 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 OR6V1Q8N148 313 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 BMPERQ8N8U9 685 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 FAM174AQ8TBP5 190 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 ZNF721Q8TF20 911 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 TSPAN32Q96QS1 320 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 NKX3-1Q99801 234 aaPredicted RBP14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 NMNAT2Q9BZQ4 307 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 SLC7A5P2Q9GIP4 190 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 CTSFQ9UBX1 484 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 HIF3AQ9Y2N7 669 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 PI4KAP42356 2102 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 ALX3O95076 343 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 UCHL1P09936 223 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 HLA-DMAP28067 261 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 SLC6A1P30531 599 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 SDHAP31040 664 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 EFR3AQ14156 821 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 ZSWIM7Q19AV6 140 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 MESTQ5EB52 335 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 PRR23CQ6ZRP0 262 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 FAM122BQ7Z309 247 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 OR7G1Q8NGA0 311 aa14.36□□□□□ -0.11
NCKIPSD-201ENST00000294129 RGP1Q92546 391 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms