RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ZNF43P17038 809 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 SLC15A1P46059 708 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 RAB39AQ14964 217 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 SLC25A25Q6KCM7 469 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 MBOAT2Q6ZWT7 520 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 TRAPPC6BQ86SZ2 158 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ATG4DQ86TL0 474 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 FOXRED2Q8IWF2 684 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ACOT11Q8WXI4 607 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 WFDC6Q9BQY6 131 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 UCK2Q9BZX2 261 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 OR2B2Q9GZK3 357 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 SMURF1Q9HCE7 757 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 RLIMQ9NVW2 624 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 COMMD9Q9P000 198 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 GRHPRQ9UBQ7 328 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 MALT1Q9UDY8 824 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 MGAT4BQ9UQ53 548 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 CARD8Q9Y2G2 431 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 AP4B1Q9Y6B7 739 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 COMMD3-BMI1R4GMX3 469 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 A0A0C4DFX4 3053 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 FAM166BA8MTA8 275 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 SP1P08047 785 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ANXA8P13928 327 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 TNFRSF1BP20333 461 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 PON3Q15166 354 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ANKDD1AQ495B1 522 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF770Q6IQ21 691 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 RPUSD3Q6P087 351 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 RBM45Q8IUH3 476 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 CENPSQ8N2Z9 138 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 WDSUB1Q8N9V3 476 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 OR51L1Q8NGJ5 315 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 OR1J4Q8NGS1 313 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ADAMTS16Q8TE57 1224 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ARL5BQ96KC2 179 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 VRK1Q99986 396 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 COPS4Q9BT78 406 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 CLEC4MQ9H2X3 399 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 VNN3Q9NY84 501 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 SSR3Q9UNL2 185 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 SMIM30A4D0T7 59 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 KLRC4-KLRK1H3BQV0 150 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 GLSO94925 669 aaPredicted RBP7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 ADAP00813 363 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 HPNP05981 417 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 GRPRP30550 384 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF84P51523 738 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 ALDH3A2P51648 485 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 NUDT6P53370 316 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 RAB14P61106 215 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 ADAM8P78325 824 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 PRKCDQ05655 676 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 GTF3C1Q12789 2109 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 YIPF7Q8N8F6 280 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 SYT14Q8NB59 555 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 OR8S1Q8NH09 359 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 STK35Q8TDR2 534 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 GIPC3Q8TF64 312 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 LIPHQ8WWY8 451 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 ZCCHC14Q8WYQ9 949 aaKnown RBP7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 PPP1R14BQ96C90 147 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 ALPK1Q96QP1 1244 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 PRSS27Q9BQR3 290 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 RTN4RQ9BZR6 473 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 SLC7A7Q9UM01 511 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 MYRFQ9Y2G1 1151 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 MYO9AB2RTY4 2548 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 A0A087WUJ7 227 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 A0A1B0GWA3 101 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 J3KTA2 159 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 MASP2O00187 686 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 SOCS2O14508 198 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 OIP5O43482 229 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 GSTM3P21266 225 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 SRD5A2P31213 254 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 PTDSS1P48651 473 aaKnown RBP7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 PLPPR5Q32ZL2 321 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF468Q5VIY5 522 aaPredicted RBP7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 ZADH2Q8N4Q0 377 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 PNLDC1Q8NA58 520 aaKnown RBP7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 FDCSPQ8NFU4 85 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 OR2M7Q8NG81 312 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 SPRYD4Q8WW59 207 aaPredicted RBP7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 DNAJB11Q9UBS4 358 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 MCTS1Q9ULC4 181 aaKnown RBP7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 THY1P04216 161 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 GKN3PP0CG01 181 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 PRKCAP17252 672 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 UQCRC1P31930 480 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 TGFBR3Q03167 851 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 CBX3Q13185 183 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 TBR1Q16650 682 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 TIGD6Q17RP2 521 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 TIGD3Q6B0B8 471 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 GTPBP8Q8N3Z3 284 aaPredicted RBP7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 DUSP19Q8WTR2 217 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 NPRL2Q8WTW4 380 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 TSSK6Q9BXA6 273 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms