RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PIGAP37287 484 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 MNDAP41218 407 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 TNFSF9P41273 254 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 MAGEA2P43356 314 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ACOT2P49753 483 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SGSHP51688 502 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ARPP19P56211 112 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 NUP107P57740 925 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 MLF1P58340 268 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SNRPFP62306 86 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 VSNL1P62760 191 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 KCNJ2P63252 427 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 MRPS25P82663 173 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 SMARCB1Q12824 385 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 GPR17Q13304 367 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 GPR50Q13585 617 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 CEACAM7Q14002 265 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 FAM189A2Q15884 450 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 TNXAQ16473 311 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SNAI3Q3KNW1 292 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ALG10Q5BKT4 473 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ALG10BQ5I7T1 473 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 DMKNQ6E0U4 476 aaPredicted RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 C22orf42Q6IC83 251 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 NEPROQ6NW34 567 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ARMCX5Q6P1M9 558 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 KCTD18Q6PI47 426 aaPredicted RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 ZNF562Q6V9R5 426 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 TMPRSS11AQ6ZMR5 421 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 RBM44Q6ZP01 1051 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 RTL4Q6ZR62 310 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ANKRD37Q7Z713 158 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 MOB3BQ86TA1 216 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ERICH1Q86X53 443 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ERI1Q8IV48 349 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 ZNF100Q8IYN0 542 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ZBED8Q8IZ13 594 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 LGI2Q8N0V4 545 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 LRRC57Q8N9N7 239 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ADAD2Q8NCV1 583 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 PPFIBP2Q8ND30 876 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 OR5D18Q8NGL1 313 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 OR13J1Q8NGT2 312 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 OR52E5Q8NH55 327 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 HMGCLL1Q8TB92 370 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ARRDC2Q8TBH0 407 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 FAM110BQ8TC76 370 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 TCP10LQ8TDR4 215 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SLC38A5Q8WUX1 472 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 TMEM18Q96B42 140 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 UPRTQ96BW1 309 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 NUS1Q96E22 293 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 DNAJC1Q96KC8 554 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 SERPINB11Q96P15 392 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 RANBP9Q96S59 729 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 CYP2S1Q96SQ9 504 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 MAP3K3Q99759 626 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 VN1R1Q9GZP7 353 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 MFSD1Q9H3U5 465 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 C1orf198Q9H425 327 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ZNF665Q9H7R5 613 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 RNF121Q9H920 327 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 OLFML3Q9NRN5 406 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 NECAP2Q9NVZ3 263 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 TUBGCP4Q9UGJ1 667 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SLC12A6Q9UHW9 1150 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 FZR1Q9UM11 496 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 PTGDR2Q9Y5Y4 395 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 MN1Q10571 1320 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 PVALEFA0A1B0GWK0 134 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 A0A1W2PRD5 423 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 MED19A0JLT2 244 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 ZNF233A6NK53 670 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 SMIM23A6NLE4 172 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 C2CD4BA6NLJ0 364 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 SRRM4A7MD48 611 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 PRR32B1ATL7 298 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 H0YJX3 145 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 M0R3G1 203 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CCL24O00175 119 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 IMPA2O14732 288 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 WNT9BO14905 357 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ARPC2O15144 300 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 B4GAT1O43505 415 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 RNASEH1O60930 286 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 AP2A2O94973 939 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 SEC24AO95486 1093 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 NADKO95544 446 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 FGF19O95750 216 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 CRYABP02511 175 aaKnown RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 WNT1P04628 370 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 GP1BAP07359 652 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 RD3LP0DJH9 198 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 NR2C1P13056 603 aa4.01□□□□□ -1.77
CD44-202ENST00000278385 ZNF7P17097 686 aaPredicted RBP4.01□□□□□ -1.77
CD44-202ENST00000278385 PGAM1P18669 254 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms