RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 NEIL3Q8TAT5 605 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 SNX33Q8WV41 574 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 ASB15Q8WXK1 588 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 ABTB1Q969K4 478 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-201ENST00000276573 RASL10BQ96S79 203 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 CMKLR1Q99788 373 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 ABCB10Q9NRK6 738 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 INIPQ9NRY2 104 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 TBCCD1Q9NVR7 557 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 KLRF1Q9NZS2 232 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 AKAP7Q9P0M2 348 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-201ENST00000276573 COPS3Q9UNS2 423 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 CMAHPQ9Y471 501 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 COL6A3P12111 3177 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 SHISA3A0PJX4 238 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 LNP1A1A4G5 178 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ISPDA4D126 451 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 FTCDNL1E5RQL4 147 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 C11orf98E9PRG8 122 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 DCTN6O00399 190 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 PLPP3O14495 311 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 DVL2O14641 736 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ARHGEF9O43307 516 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 TBX1O43435 398 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 PFDN1O60925 122 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 CBFA2T3O75081 653 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 SNX4O95219 450 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 OR6A2O95222 327 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 TGM1P22735 817 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 GTF2E2P29084 291 aaKnown RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ACVR1BP36896 505 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 GBX2P52951 348 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 RPL27P61353 136 aaKnown RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ACTA2P62736 377 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ACTG2P63267 376 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 SIRPAP78324 504 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 DCAF12Q5T6F0 453 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 RPTNQ6XPR3 784 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 SLC16A9Q7RTY1 509 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 LYSMD2Q8IV50 215 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 MS4A15Q8N5U1 240 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 MINDY2Q8NBR6 621 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 FAM83FQ8NEG4 500 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 OR10G3Q8NGC4 313 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 OR2T4Q8NH00 348 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 M1APQ8TC57 530 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 THAP4Q8WY91 577 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 GHSRQ92847 366 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 PELI1Q96FA3 418 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 MRPL48Q96GC5 212 aaKnown RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 TTTY10Q9BZA0 68 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 KCNN2Q9H2S1 579 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 MIXL1Q9H2W2 232 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 CCDC86Q9H6F5 360 aaKnown RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 METTL7AQ9H8H3 244 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ABCB9Q9NP78 766 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 WDR70Q9NW82 654 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 MRPL39Q9NYK5 338 aaKnown RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 PPP4R1LQ9P1A2 415 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ST6GALNAC2Q9UJ37 374 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 GRIP1Q9Y3R0 1128 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 HRH3Q9Y5N1 445 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 B3GALT1Q9Y5Z6 326 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 HS3ST3B1Q9Y662 390 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 MPDZO75970 2070 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 SMIM30A4D0T7 59 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 H7C1C5 153 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ETV2O00321 342 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 CELA2AP08217 269 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 COX6A1P12074 109 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 CD59P13987 128 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 AHCYP23526 432 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 SHC1P29353 583 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 CASP3P42574 277 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 MTNR1BP49286 362 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 LCN6P62502 163 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 EXT1Q16394 746 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ACKR1Q16570 336 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 SLC25A53Q5H9E4 307 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 EEF1A1P5Q5VTE0 462 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 RPL22L1Q6P5R6 122 aaKnown RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 LAX1Q8IWV1 398 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 TIGD4Q8IY51 512 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 OR6V1Q8N148 313 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 NLGN4YQ8NFZ3 816 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 AP3S1Q92572 193 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 SPACA9Q96E40 222 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 PGLYRP3Q96LB9 341 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 ADAD1Q96M93 576 aaKnown RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 SDHCQ99643 169 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 PPIL3Q9H2H8 161 aaKnown RBP8.66□□□□□ -1.02
TRIM55-201ENST00000276573 TXNIPQ9H3M7 391 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 TRAPPC4Q9Y296 219 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 EXPH5Q8NEV8 1989 aa8.66□□□□□ -1.02
TRIM55-201ENST00000276573 MS4A18H0YCH9 400 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF208O43345 1280 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 EFNA2O43921 213 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 SC5DO75845 299 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 IGHEP01854 428 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 CD1AP06126 327 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms