RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 LIN54Q6MZP7 749 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 TCEAL8Q8IYN2 117 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ZNF511Q8NB15 262 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 OR4C16Q8NGL9 310 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 BRIX1Q8TDN6 353 aaKnown RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 TCTEX1D2Q8WW35 142 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 TMED6Q8WW62 240 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 S100PBPQ96BU1 408 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ZCCHC2Q9C0B9 1178 aaKnown RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 DUSP15Q9H1R2 295 aaPredicted RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 MTIF3Q9H2K0 278 aaKnown RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 HRH4Q9H3N8 390 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 IL21Q9HBE4 155 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 SGK2Q9HBY8 427 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 GULP1Q9UBP9 304 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ZDHHC8Q9ULC8 765 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 TNFSF18Q9UNG2 199 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ARID1AO14497 2285 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 KANTRA0A1W2PQU2 76 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 GABARAPH6UMI1 98 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 AP4M1O00189 453 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 FGF16O43320 207 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ZNF7P17097 686 aaPredicted RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 HTR2AP28223 471 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 TAS2R50P59544 299 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 B4GALNT1Q00973 533 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 LMAN2Q12907 356 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 TAF13Q15543 124 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 TCEAL5Q5H9L2 206 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 TEX30Q5JUR7 227 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ARHGAP11AQ6P4F7 1023 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 CLEC9AQ6UXN8 241 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 Q6ZVU0 165 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ZNF561Q8N587 486 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 SPPL3Q8TCT6 385 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 NEIL2Q969S2 332 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 NKX3-1Q99801 234 aaPredicted RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 SELENOIQ9C0D9 397 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 KLHL9Q9P2J3 617 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 GPR55Q9Y2T6 319 aaPredicted RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 TRANK1O15050 2925 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 OR5H14A6NHG9 310 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 H7C0S8 307 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 OR10H2O60403 315 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 GPR37L1O60883 481 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 HCKP08631 526 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 CD79AP11912 226 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 IL9P15248 144 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 CDK2P24941 298 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 STAT5AP42229 794 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 MECP2P51608 486 aaKnown RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 AP3S2P59780 193 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 GMFBP60983 142 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 ARF5P84085 180 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 EXOSC6Q5RKV6 272 aaKnown RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 MRM1Q6IN84 353 aaKnown RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 PSRC1Q6PGN9 363 aaPredicted RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 CD300LDQ6UXZ3 194 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 LRRC70Q7Z2Q7 622 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 TMEM200AQ86VY9 491 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 FAM24BQ8N5W8 94 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 MRPL43Q8N983 215 aaKnown RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 TEFMQ96QE5 360 aaKnown RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 TCEAL7Q9BRU2 100 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 SYNPO2LQ9H987 977 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 RPS10P5Q9NQ39 176 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.04□□□□□ -1.12
VAPB-201ENST00000265619 FAM212BQ9NTI7 297 aaPredicted RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 TAS2R10Q9NYW0 307 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 FOXJ3Q9UPW0 622 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 A0A087X0M5 115 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 A0A1B0GX30 115 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 CDHR4A6H8M9 788 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 F5H0A9 414 aaPredicted RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 PRAMEF26H0Y7S4 382 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 HMGN4O00479 90 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 CDC42EP2O14613 210 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 MTX2O75431 263 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 CLDN7O95471 211 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 TGFB1P01137 390 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 SAGP10523 405 aaPredicted RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 PRG2P13727 222 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 CEBPBP17676 345 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 DDTP30046 118 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 HTR1FP30939 366 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 TIA1P31483 386 aaKnown RBP eCLIP8.04□□□□□ -1.12
VAPB-201ENST00000265619 FNDC3BQ53EP0 1204 aaKnown RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 GLB1L2Q8IW92 636 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 ARL14Q8N4G2 192 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 PAQR4Q8N4S7 273 aaPredicted RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 TMIEQ8NEW7 156 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 FCAMRQ8WWV6 532 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 KISS1RQ969F8 398 aaPredicted RBP8.04□□□□□ -1.12
VAPB-201ENST00000265619 ARSGQ96EG1 525 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 MED8Q96G25 268 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 PDCD1LG2Q9BQ51 273 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 MAGEH1Q9H213 219 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 NKX2-4Q9H2Z4 354 aa8.04□□□□□ -1.12
VAPB-201ENST00000265619 TAAR2Q9P1P5 351 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms