RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SERPINA3P01011 423 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 SULT1A3P0DMM9 295 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 SULT1A4P0DMN0 295 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 LIPCP11150 499 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 HPGDP15428 266 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 EFNB2P52799 333 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 CTXN1P60606 82 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 PSMA6P60900 246 aaKnown RBP8.34□□□□□ -1.08
MSH4-201ENST00000263187 RAB14P61106 215 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 HSF2Q03933 536 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 NFATC4Q14934 902 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 KIR2DS3Q14952 304 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 C2orf68Q2NKX9 166 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 UBE2NLQ5JXB2 153 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 LIPNQ5VXI9 398 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 NUDT18Q6ZVK8 323 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 GLB1L2Q8IW92 636 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 SAMD14Q8IZD0 417 aaPredicted RBP8.34□□□□□ -1.08
MSH4-201ENST00000263187 SLC37A2Q8TED4 501 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 FCAMRQ8WWV6 532 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 JAM3Q9BX67 310 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 PBX4Q9BYU1 374 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 MS4A7Q9GZW8 240 aaPredicted RBP8.34□□□□□ -1.08
MSH4-201ENST00000263187 INPP5EQ9NRR6 644 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 NTMQ9P121 344 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 ENTPD2Q9Y5L3 495 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 CABIN1Q9Y6J0 2220 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 RP1P56715 2156 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 C2orf16Q68DN1 1984 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 FXYD6-FXYD2A0A087WZ82 144 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 G3V3Q6 166 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 KRT33AO76009 404 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 OR7A10O76100 309 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 CSN2P05814 226 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 ADRA2CP18825 462 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 C1QL3Q5VWW1 255 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 RPL22L1Q6P5R6 122 aaKnown RBP8.33□□□□□ -1.08
MSH4-201ENST00000263187 ULK3Q6PHR2 472 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 JAZF1Q86VZ6 243 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 OR5M1Q8NGP8 315 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 SLC25A36Q96CQ1 311 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 SFXN2Q96NB2 322 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 SORCS2Q96PQ0 1159 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 FXYD6Q9H0Q3 95 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 RXFP3Q9NSD7 469 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 ABRACLQ9P1F3 81 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 UBQLN2Q9UHD9 624 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 V9GY05 133 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 DOCK8Q8NF50 2099 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 A0A1B0GVI7 797 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 ELOA3DA6NLF2 546 aaPredicted RBP8.33□□□□□ -1.08
MSH4-201ENST00000263187 OGG1O15527 345 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 KDM4BO94953 1096 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 NUDT14O95848 222 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 APEHP13798 732 aaKnown RBP8.33□□□□□ -1.08
MSH4-201ENST00000263187 CXCL2P19875 107 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 GALP22466 123 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 DIO1P49895 249 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 P2RX1P51575 399 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 ARHGDIBP52566 201 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 ILF3Q12906 894 aaKnown RBP eCLIP8.33□□□□□ -1.08
MSH4-201ENST00000263187 HTR4Q13639 388 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 GAS6Q14393 721 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 CD226Q15762 336 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 ELOA3BQ3SY89 546 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 PRAMEF17Q5VTA0 474 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 RPL13AP3Q6NVV1 102 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 GLRX5Q86SX6 157 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 ZNF676Q8N7Q3 588 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 BOLLQ8N9W6 283 aaKnown RBP8.33□□□□□ -1.08
MSH4-201ENST00000263187 LSM14AQ8ND56 463 aaKnown RBP8.33□□□□□ -1.08
MSH4-201ENST00000263187 ELOA3Q8NG57 546 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 OR51D1Q8NGF3 324 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 C16orf52Q8NHV5 167 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
MSH4-201ENST00000263187 HAVCR2Q8TDQ0 301 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 S100A16Q96FQ6 103 aaKnown RBP8.33□□□□□ -1.08
MSH4-201ENST00000263187 CXorf58Q96LI9 332 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 AMELYQ99218 206 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 TRIM2Q9C040 744 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 TMEM138Q9NPI0 162 aa8.33□□□□□ -1.08
MSH4-201ENST00000263187 ANXA2P2A6NMY6 339 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 PYCARD-AS1I3L0S3 204 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 ANXA2P07355 339 aaKnown RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 ATF4P18848 351 aaPredicted RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 ACTA2P62736 377 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 ACTG2P63267 376 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 TRAM1Q15629 374 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 PCGF3Q3KNV8 242 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 SLC22A10Q63ZE4 541 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 KDM8Q8N371 416 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 BAHD1Q8TBE0 780 aaPredicted RBP8.32□□□□□ -1.08
MSH4-201ENST00000263187 GAL3ST4Q96RP7 486 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 SFXN1Q9H9B4 322 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 GDE1Q9NZC3 331 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 KLHL9Q9P2J3 617 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 SCP2D1Q9UJQ7 156 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 ZNF281Q9Y2X9 895 aa8.32□□□□□ -1.08
MSH4-201ENST00000263187 WDFY4Q6ZS81 3184 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms