RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 RP1L1Q8IWN7 2480 aaPredicted RBP21.71■■□□□ 1.07
SCN1B-201ENST00000262631 NBASA2RRP1 2371 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 CD8B2A6NJW9 211 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 NDUFB2O95178 105 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 RCBTB2O95199 551 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 POU1F1P28069 291 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 RASGEF1BQ0VAM2 473 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 ANKDD1AQ495B1 522 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 C1orf185Q5T7R7 199 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 NHLRC1Q6VVB1 395 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 PACRGLQ8N7B6 248 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 CLDN22Q8N7P3 220 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 C9orf106Q8NAJ2 232 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 ZNF775Q96BV0 537 aaPredicted RBP21.71■■□□□ 1.07
SCN1B-201ENST00000262631 TP63Q9H3D4 680 aaPredicted RBP21.71■■□□□ 1.07
SCN1B-201ENST00000262631 RNF122Q9H9V4 155 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 CALHM2Q9HA72 323 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 CLEC4AQ9UMR7 237 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 ADAM18Q9Y3Q7 739 aa21.71■■□□□ 1.07
SCN1B-201ENST00000262631 PTGER4P35408 488 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 POU3F1Q03052 451 aaPredicted RBP21.7■■□□□ 1.06
SCN1B-201ENST00000262631 PXKQ7Z7A4 578 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 OR9K2Q8NGE7 335 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 WNT2BQ93097 391 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 OXGR1Q96P68 337 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 MBOAT4Q96T53 435 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 TOR3AQ9H497 397 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 BATF3Q9NR55 127 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 OSGIN2Q9Y236 505 aa21.7■■□□□ 1.06
SCN1B-201ENST00000262631 LOC102725191A0A1B0GVB3 256 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 TRAF3IP2O43734 574 aaPredicted RBP21.69■■□□□ 1.06
SCN1B-201ENST00000262631 VAMP5O95183 116 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 RPL4P36578 427 aaKnown RBP21.69■■□□□ 1.06
SCN1B-201ENST00000262631 P4HA3Q7Z4N8 544 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 WDFY1Q8IWB7 410 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 SLC43A2Q8N370 569 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 IQCF1Q8N6M8 205 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 KATNB1Q9BVA0 655 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 GABARAPL3Q9BY60 117 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 RIBC2Q9H4K1 309 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 C8orf4Q9NR00 106 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 INIPQ9NRY2 104 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 TBC1D23Q9NUY8 699 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 TOXO94900 526 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 SLC16A1P53985 500 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 CRISP1P54107 249 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 RAD23AP54725 363 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 CTXN1P60606 82 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 ERVK-25P63136 954 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 NPRL3Q12980 569 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 POU4F3Q15319 338 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 TMEM236Q5W0B7 351 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 B3GNT6Q6ZMB0 384 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 GCNT2Q8N0V5 402 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 ZIC4Q8N9L1 334 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 ANKK1Q8NFD2 765 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 TXNDC15Q96J42 360 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 ZNF385AQ96PM9 386 aaKnown RBP21.69■■□□□ 1.06
SCN1B-201ENST00000262631 GPX7Q96SL4 187 aaPredicted RBP21.69■■□□□ 1.06
SCN1B-201ENST00000262631 SF3B5Q9BWJ5 86 aaKnown RBP21.69■■□□□ 1.06
SCN1B-201ENST00000262631 TSSK6Q9BXA6 273 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 NRIP3Q9NQ35 241 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 MED29Q9NX70 200 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 SMPD3Q9NY59 655 aaPredicted RBP21.69■■□□□ 1.06
SCN1B-201ENST00000262631 ORC6Q9Y5N6 252 aa21.69■■□□□ 1.06
SCN1B-201ENST00000262631 MBD3L4A6NDZ8 208 aaPredicted RBP21.68■■□□□ 1.06
SCN1B-201ENST00000262631 MBD3L3A6NE82 208 aaPredicted RBP21.68■■□□□ 1.06
SCN1B-201ENST00000262631 MBD3L5A6NJ08 208 aaPredicted RBP21.68■■□□□ 1.06
SCN1B-201ENST00000262631 BHLHE40O14503 412 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 PPP1R3DO95685 299 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 FCGR2AP12318 317 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 ZNF43P17038 809 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 NTF4P34130 210 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 AQP4P55087 323 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 ESRRGP62508 458 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 SF3B4Q15427 424 aaKnown RBP eCLIP21.68■■□□□ 1.065e-6■■■■□ 26.7
SCN1B-201ENST00000262631 RPL13AP3Q6NVV1 102 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 NCCRP1Q6ZVX7 275 aaPredicted RBP21.68■■□□□ 1.06
SCN1B-201ENST00000262631 CREB3L2Q70SY1 520 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 UEVLDQ8IX04 471 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 MARVELD2Q8N4S9 558 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 OR4Q3Q8NH05 313 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 MBD3L2Q8NHZ7 208 aaPredicted RBP21.68■■□□□ 1.06
SCN1B-201ENST00000262631 TEX47Q8TBZ9 253 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 TTYH2Q9BSA4 534 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 KLHL9Q9P2J3 617 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 POLEQ07864 2286 aa21.68■■□□□ 1.06
SCN1B-201ENST00000262631 IGKV3D-15A0A087WSY6 115 aa21.67■■□□□ 1.06
SCN1B-201ENST00000262631 TRGV8A0A0C4DH27 118 aa21.67■■□□□ 1.06
SCN1B-201ENST00000262631 CD14P08571 375 aa21.67■■□□□ 1.06
SCN1B-201ENST00000262631 HOXD4P09016 255 aaPredicted RBP21.67■■□□□ 1.06
SCN1B-201ENST00000262631 IFNGR1P15260 489 aa21.67■■□□□ 1.06
SCN1B-201ENST00000262631 SLC6A6P31641 620 aa21.67■■□□□ 1.06
SCN1B-201ENST00000262631 TOP3AQ13472 1001 aaPredicted RBP21.67■■□□□ 1.06
SCN1B-201ENST00000262631 C1DQ13901 141 aaKnown RBP21.67■■□□□ 1.06
SCN1B-201ENST00000262631 PTGES3Q15185 160 aaKnown RBP21.67■■□□□ 1.06
SCN1B-201ENST00000262631 RNPS1Q15287 305 aaKnown RBP21.67■■□□□ 1.06
SCN1B-201ENST00000262631 ACKR1Q16570 336 aa21.67■■□□□ 1.06
SCN1B-201ENST00000262631 DPY19L2P2Q6ZN68 376 aa21.67■■□□□ 1.06
SCN1B-201ENST00000262631 FAM122BQ7Z309 247 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms