RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 PUDPQ08623 228 aa9.2□□□□□ -0.94
LIG3-201ENST00000262327 METTL27Q8N6F8 245 aaPredicted RBP9.2□□□□□ -0.94
LIG3-201ENST00000262327 OR9A4Q8NGU2 314 aa9.2□□□□□ -0.94
LIG3-201ENST00000262327 FLVCR1-AS1Q8TAF5 88 aa9.2□□□□□ -0.94
LIG3-201ENST00000262327 ZNF436Q9C0F3 470 aaPredicted RBP9.2□□□□□ -0.94
LIG3-201ENST00000262327 ACTR10Q9NZ32 417 aa9.2□□□□□ -0.94
LIG3-201ENST00000262327 NTMQ9P121 344 aa9.2□□□□□ -0.94
LIG3-201ENST00000262327 MGAT4CQ9UBM8 478 aa9.2□□□□□ -0.94
LIG3-201ENST00000262327 ING1Q9UK53 422 aaPredicted RBP9.2□□□□□ -0.94
LIG3-201ENST00000262327 CAMK2AQ9UQM7 478 aa9.2□□□□□ -0.94
LIG3-201ENST00000262327 PCDHGA9Q9Y5G4 932 aaKnown RBP9.2□□□□□ -0.94
LIG3-201ENST00000262327 A0A1W2PQF6 199 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 RPS10-NUDT3A0A1W2PQS6 291 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 TVP23AA6NH52 213 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 PRR19A6NJB7 356 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 RAD1O60671 282 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 ARL6IP5O75915 188 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 GPR75O95800 540 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 CBX7O95931 251 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 UCHL1P09936 223 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 LCN1P31025 176 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 ADH7P40394 386 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 CCR4P51679 360 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 PITPNAQ00169 270 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 HSF2Q03933 536 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 MGAT2Q10469 447 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 PON3Q15166 354 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 SFRP5Q5T4F7 317 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 FAM199XQ6PEV8 388 aaPredicted RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 PM20D2Q8IYS1 436 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 MOSPD2Q8NHP6 518 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 C1orf216Q8TAB5 229 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 SMIM4Q8WVI0 70 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 RERGQ96A58 199 aaPredicted RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 SLC25A38Q96DW6 304 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 LMF1Q96S06 567 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 KCNK15Q9H427 330 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 NRIP3Q9NQ35 241 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 INPP5EQ9NRR6 644 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 HCN3Q9P1Z3 774 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 LRIT1Q9P2V4 623 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 GPR89AB7ZAQ6 455 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 PRSS44E7EML9 344 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 SMAD9O15198 467 aaKnown RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 NUPL2O15504 423 aaKnown RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 FMO6PO60774 539 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 ZFPL1O95159 310 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 FBXO45P0C2W1 286 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 GPR89BP0CG08 455 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 SMIM10L1P0DMW3 83 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 MAT1AQ00266 395 aaKnown RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 PSG6Q00889 435 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 STX4Q12846 297 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 TRAM1Q15629 374 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 AANATQ16613 207 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 TCTE1Q5JU00 501 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 YOD1Q5VVQ6 348 aaPredicted RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 ARHGAP11AQ6P4F7 1023 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 Q7L0L9 218 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 OR56B4Q8NH76 319 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 SYNPRQ8TBG9 265 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 ST8SIA4Q92187 359 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 RGP1Q92546 391 aaPredicted RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 SIPA1Q96FS4 1042 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 SMIM10Q96HG1 83 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 Q96M85 177 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 C12orf57Q99622 126 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 ULBP3Q9BZM4 244 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 TCEAL2Q9H3H9 227 aaPredicted RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 SRA1Q9HD15 236 aaKnown RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 NANSQ9NR45 359 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 DUSP22Q9NRW4 184 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 DNAJB12Q9NXW2 375 aaKnown RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 CHRNA9Q9UGM1 479 aa9.19□□□□□ -0.94
LIG3-201ENST00000262327 TDRD6O60522 2096 aaKnown RBP9.19□□□□□ -0.94
LIG3-201ENST00000262327 TMEM72A0PK05 275 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 SHISA7A6NL88 538 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 M0R233 179 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 CYR61O00622 381 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 OGG1O15527 345 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 MAS1P04201 325 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 ATP1B1P05026 303 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 COL9A1P20849 921 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 CCINQ13939 588 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 LINC00303Q3SY05 128 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 GPR139Q6DWJ6 353 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 POMZP3Q6PJE2 187 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 ABHD13Q7L211 337 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 DEFB123Q8N688 67 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 OR4C3Q8NH37 302 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 NT5CQ8TCD5 201 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 TM4SF19Q96DZ7 209 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 ELMOD3Q96FG2 381 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 ZFYVE21Q9BQ24 234 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 RDH8Q9NYR8 311 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 ABRACLQ9P1F3 81 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 KLHDC2Q9Y2U9 406 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 AUP1Q9Y679 476 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 FKBP7Q9Y680 259 aa9.18□□□□□ -0.94
LIG3-201ENST00000262327 CNTRLQ7Z7A1 2325 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms