RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RNLSQ5VYX0 342 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 ADAMTSL4Q6UY14 1074 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 IDO2Q6ZQW0 420 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF546Q86UE3 836 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 GATA6Q92908 595 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 AMDHD1Q96NU7 426 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF576Q9H609 170 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 METTL17Q9H7H0 456 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 FBXL2Q9UKC9 423 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 MYH10P35580 1976 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 TMEM202A6NGA9 273 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF705GA8MUZ8 300 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 KITLGP21583 273 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 ELAVL4P26378 380 aaKnown RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 GIPRP48546 466 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 EBPQ15125 230 aaKnown RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 TBCEQ15813 527 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 KCTD11Q693B1 232 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 GHSRQ92847 366 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 DAZAP1Q96EP5 407 aaKnown RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 NIPSNAP1Q9BPW8 284 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 HDAC8Q9BY41 377 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 SEMA6CQ9H3T2 930 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 DUSP13Q9UII6 198 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 MCRIP1C9JLW8 97 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 M0QYG6 137 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 FADS1O60427 444 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 KLKB1P03952 638 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 GABRA5P31644 462 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 SLC1A3P43003 542 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 RTL6Q6ICC9 239 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 PARM1Q6UWI2 310 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 OR7G1Q8NGA0 311 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 OR4N2Q8NGD1 307 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 NKX3-1Q99801 234 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 TMEM59Q9BXS4 323 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 GLI3P10071 1580 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 A0A1B0GWA3 101 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 IL1AP01583 271 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 MRPS34P82930 218 aaKnown RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 FOXK2Q01167 660 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 TRIM61Q5EBN2 209 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 TMEM71Q6P5X7 295 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 MAVSQ7Z434 540 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 ENTHD1Q8IYW4 607 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 TCTEX1D2Q8WW35 142 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 WDR76Q9H967 626 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 NRIP3Q9NQ35 241 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 SDHAF2Q9NX18 166 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 GPR160Q9UJ42 338 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 TMEM82A0PJX8 343 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 TMEM212A6NML5 194 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 KCNK5O95279 499 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 BLVRBP30043 206 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 PEA15Q15121 130 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 PAPD4Q6PIY7 484 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 CPNE4Q96A23 557 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 FGGYQ96C11 551 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 CENPOQ9BU64 300 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 AMBRA1Q9C0C7 1298 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 GFOD1Q9NXC2 390 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 GNG12Q9UBI6 72 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 STEAP1Q9UHE8 339 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 SLC22A7Q9Y694 548 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 P2RX6O15547 441 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 CHRNB4P30926 498 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 PFN3P60673 137 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 RELAQ04206 551 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 AKR1C1Q04828 323 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 RNF113BQ8IZP6 322 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 OR4A16Q8NH70 328 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 EDAQ92838 391 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF436Q9C0F3 470 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 TXNL4BQ9NX01 149 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ZC3H12DA2A288 527 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ICAM2P13598 275 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 MMP12P39900 470 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF169Q14929 603 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 CST9Q5W186 159 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ALKAL2Q6UX46 152 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 SYT9Q86SS6 491 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 CCDC71Q8IV32 467 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 SCCPDHQ8NBX0 429 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 OR52I1Q8NGK6 324 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 UBTD2Q8WUN7 234 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 UBXN10Q96LJ8 280 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 PIGQQ9BRB3 760 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ANKRD19PQ9H560 264 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 FAM166BA8MTA8 275 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 H0Y8X5 98 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 I6L893 689 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 UBBP0CG47 229 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 UBCP0CG48 685 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 GDNFP39905 211 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 LIM2P55344 173 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 EDDM3BP56851 147 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 RPS27AP62979 156 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 UBA52P62987 128 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 PDLIM3Q53GG5 364 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms