RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ABHD17BQ5VST6 288 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 OVOS1Q6IE37 1185 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM220Q6QAJ8 160 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 LINGO4Q6UY18 593 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 TCF24Q7RTU0 167 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 SERPINA11Q86U17 422 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 MFSD6LQ8IWD5 586 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 SLC30A8Q8IWU4 369 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 MRPL41Q8IXM3 137 aaKnown RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 GABRG1Q8N1C3 465 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 MIER2Q8N344 545 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 PNLDC1Q8NA58 520 aaKnown RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 ISOC2Q96AB3 205 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 NICN1Q9BSH3 213 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 ASPNQ9BXN1 380 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 IL22Q9GZX6 179 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 UBQLN3Q9H347 655 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 RPS10P5Q9NQ39 176 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 UQCC1Q9NVA1 299 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 GULP1Q9UBP9 304 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 HACL1Q9UJ83 578 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 SLC16A5O15375 505 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 DFFBO76075 338 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 GLP2RO95838 553 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 ANXA4P09525 319 aaPredicted RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 TBC1D3HP0C7X1 549 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 GPR12P47775 334 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 RPS20P60866 119 aaKnown RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 RAB8AP61006 207 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 SEC61A1P61619 476 aaKnown RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 RAB11AP62491 216 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 RPS27AP62979 156 aaKnown RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 PSG6Q00889 435 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 UGCGQ16739 394 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 ARSIQ5FYB1 569 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 STEAP1BQ6NZ63 245 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 CALHM1Q8IU99 346 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 FBXO36Q8NEA4 188 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 OR2A12Q8NGT7 310 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 FAM45AQ8TCE6 357 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 RNASEH2CQ8TDP1 164 aaKnown RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM159Q96B96 161 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 FCRL5Q96RD9 977 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 NUDT9Q9BW91 350 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 DPH1Q9BZG8 443 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 CRISPLD1Q9H336 500 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 HRH4Q9H3N8 390 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 IL1RL2Q9HB29 575 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 PLEKHJ1Q9NW61 149 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 AURKAIP1Q9NWT8 199 aaPredicted RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 GPR83Q9NYM4 423 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 STEAP1Q9UHE8 339 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 RFNGQ9Y644 331 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 CFAP20Q9Y6A4 193 aaKnown RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 SCN9AQ15858 1988 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 OR6C76A6NM76 312 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 E5RGE8 158 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CILPO75339 1184 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 FBXO24O75426 580 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 RDH16O75452 317 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 MMP23AO75900 390 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TFP02787 698 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 UMODP07911 640 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 OR10J4P0C629 311 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ANKRD34CP0C6C1 535 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 PPIAL4GP0DN37 164 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CSNK2A2P19784 350 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 BCL6P41182 706 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CSNK1A1P48729 337 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CYB561P49447 251 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 FLT3LGP49771 235 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SUMO3P55854 103 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CTBP2P56545 445 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 RUNX2Q13950 521 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 GPR18Q14330 331 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF234Q14588 700 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 COX19Q49B96 90 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CARD17Q5XLA6 110 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF562Q6V9R5 426 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TMPPEQ6ZT21 453 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 LMNTD1Q8N9Z9 388 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 GPX8Q8TED1 209 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CASTOR1Q8WTX7 329 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 EDEM1Q92611 657 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SFRP2Q96HF1 295 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 HRASLS5Q96KN8 279 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 HSPA12BQ96MM6 686 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 PHF7Q9BWX1 381 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SGPP1Q9BX95 441 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 MTG2Q9H4K7 406 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 PLEKHA2Q9HB19 425 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 NMRK2Q9NPI5 230 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 UBQLN4Q9NRR5 601 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TAS2R13Q9NYV9 303 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 NTMQ9P121 344 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 PTGFRNQ9P2B2 879 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 SPIN1Q9Y657 262 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM265A0A087WTH1 108 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 CORTO00230 105 aa7.1□□□□□ -1.27
GPNMB-201ENST00000258733 UPK1AO00322 258 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms