RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 MGARPQ8TDB4 240 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 TAAR8Q969N4 342 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 SLC25A36Q96CQ1 311 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 MSI2Q96DH6 328 aaKnown RBP11.3□□□□□ -0.6
MRPL35-201ENST00000254644 ZNF837Q96EG3 531 aaPredicted RBP11.3□□□□□ -0.6
MRPL35-201ENST00000254644 SLC41A3Q96GZ6 507 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 DOK1Q99704 481 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 PIMREGQ9BSJ6 248 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 RAD21L1Q9H4I0 556 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 ZNF442Q9H7R0 627 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 GPR35Q9HC97 309 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 SLAMF8Q9P0V8 285 aa11.3□□□□□ -0.6
MRPL35-201ENST00000254644 TRBV5-3A0A0A0MS03 114 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 MS4A18H0YCH9 400 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 TPST1O60507 370 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 IGFBP1P08833 259 aaPredicted RBP11.29□□□□□ -0.6
MRPL35-201ENST00000254644 CELA3BP08861 270 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 ARAFP10398 606 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 GIFP27352 417 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 IDH3GP51553 393 aaPredicted RBP11.29□□□□□ -0.6
MRPL35-201ENST00000254644 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
MRPL35-201ENST00000254644 ARF1P84077 181 aaKnown RBP11.29□□□□□ -0.6
MRPL35-201ENST00000254644 MS4A18Q3C1V0 323 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 PHYHD1Q5SRE7 291 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 DHRS4L2Q6PKH6 230 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 BLOC1S3Q6QNY0 202 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 ANKS4BQ8N8V4 417 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 ADPRHL1Q8NDY3 354 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 OR6S1Q8NH40 331 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 DNAJA4Q8WW22 397 aaPredicted RBP11.29□□□□□ -0.6
MRPL35-201ENST00000254644 SLC38A4Q969I6 547 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 ZNF75AQ96N20 296 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 OR2M2Q96R28 347 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 KCNS3Q9BQ31 491 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 SHARPINQ9H0F6 387 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 TMBIM4Q9HC24 238 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 B3GNT2Q9NY97 397 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
MRPL35-201ENST00000254644 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 USH1CQ9Y6N9 552 aa11.29□□□□□ -0.6
MRPL35-201ENST00000254644 NBEAL1Q6ZS30 2694 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 A0A1B0GWA3 101 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 M0R082 166 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 AIM2O14862 343 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 TPST2O60704 377 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 SLC43A1O75387 559 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 ZNF23P17027 643 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 GRPRP30550 384 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 THBS4P35443 961 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 ARR3P36575 388 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 GGTLC2Q14390 218 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 CEACAM16Q2WEN9 425 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 KRTAP24-1Q3LI83 254 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 GLIPR1L2Q4G1C9 344 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 FAM91A1Q658Y4 838 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 FAM166AQ6J272 317 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 REEP3Q6NUK4 255 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 H1FNTQ75WM6 255 aaPredicted RBP11.28□□□□□ -0.6
MRPL35-201ENST00000254644 ZNF627Q7L945 461 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 CCDC36Q8IYA8 594 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 ZNF417Q8TAU3 575 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 LRR1Q96L50 414 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 ZNF587Q96SQ5 575 aaPredicted RBP11.28□□□□□ -0.6
MRPL35-201ENST00000254644 VRK1Q99986 396 aaPredicted RBP11.28□□□□□ -0.6
MRPL35-201ENST00000254644 SOX7Q9BT81 388 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 CRLF2Q9HC73 371 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 VAPAQ9P0L0 249 aa11.28□□□□□ -0.6
MRPL35-201ENST00000254644 TRAV36DV7A0A075B6V5 113 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 A0A087WUJ7 227 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 IGHV2OR16-5A0A0B4J2B6 119 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 ZNF99A8MXY4 864 aaPredicted RBP11.27□□□□□ -0.61
MRPL35-201ENST00000254644 TGDSO95455 350 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 STAMBPO95630 424 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 HPRP00739 348 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 TACSTD2P09758 323 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 GPX2P18283 190 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 NPR2P20594 1047 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 GTF2E2P29084 291 aaKnown RBP11.27□□□□□ -0.61
MRPL35-201ENST00000254644 CDK6Q00534 326 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 POU3F1Q03052 451 aaPredicted RBP11.27□□□□□ -0.61
MRPL35-201ENST00000254644 ADRM1Q16186 407 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 ALG10BQ5I7T1 473 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 PAGE3Q5JUK9 113 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 FAM120AOSQ5T036 256 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 ULK3Q6PHR2 472 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 SLC46A3Q7Z3Q1 461 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 C20orf196Q8IYI0 205 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 GPR137CQ8N3F9 429 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 GOLGA6L1Q8N7Z2 621 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 ZNF540Q8NDQ6 660 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 PIK3C3Q8NEB9 887 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 IL17RDQ8NFM7 739 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 NFKBIDQ8NI38 313 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 NEU4Q8WWR8 484 aaPredicted RBP11.27□□□□□ -0.61
MRPL35-201ENST00000254644 C7orf26Q96N11 449 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 WFDC6Q9BQY6 131 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 BPESC1Q9GZL8 116 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 RAB1BQ9H0U4 201 aa11.27□□□□□ -0.61
MRPL35-201ENST00000254644 IKZF5Q9H5V7 419 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms