RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 OR8B8Q15620 311 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 BORAQ6PGQ7 559 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 TPRA1Q86W33 373 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 ENTHD1Q8IYW4 607 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 MALSU1Q96EH3 234 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 SPHK1Q9NYA1 384 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 GNG12Q9UBI6 72 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 COPS3Q9UNS2 423 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 PCDHGA5Q9Y5G8 931 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 A0A1B0GTW7 788 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 ANKRD34BA5PLL1 514 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 TAS2R19P59542 299 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 SLC48A1Q6P1K1 146 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 ASB17Q8WXJ9 295 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 SLC38A1Q9H2H9 487 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 RANGRFQ9HD47 186 aaPredicted RBP17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 HRASLSQ9HDD0 168 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 SNX11Q9Y5W9 270 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 A0A1W2PPV4 95 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 CLEC2LP0C7M8 214 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 EDDM3BP56851 147 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 C17orf67Q0P5P2 114 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 SOWAHCQ53LP3 525 aaPredicted RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 PAN3Q58A45 887 aaKnown RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 HAS2Q92819 552 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 FOXRED1Q96CU9 486 aaPredicted RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 TK1P04183 234 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 ICAM2P13598 275 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 MFAP5Q13361 173 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 MEF2DQ14814 521 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 MEP1BQ16820 701 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 OR5AS1Q8N127 324 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 L3MBTL4Q8NA19 623 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 ASB16Q96NS5 453 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 MRPS28Q9Y2Q9 187 aaKnown RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 TMX2-CTNND1H3BSU7 103 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 M0QYG6 137 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 EDDM3AQ14507 147 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 VWA2Q5GFL6 755 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 SHEQ5VZ18 495 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 ADAMTS14Q8WXS8 1223 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 SEMA4GQ9NTN9 838 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 PADI1Q9ULC6 663 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 ASB4Q9Y574 426 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 NAP1L6A6NFF2 107 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 CSO75390 466 aaKnown RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 CDK4P11802 303 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 TRIM23P36406 574 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 TBCEQ15813 527 aaPredicted RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 ZNF813Q6ZN06 617 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 YRDCQ86U90 279 aaKnown RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 CCDC74AQ96AQ1 378 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 ELP4Q96EB1 424 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 THOC3Q96J01 351 aaKnown RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 SGPP1Q9BX95 441 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 TMEM59Q9BXS4 323 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 SLCO2B1O94956 709 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 PMP2P02689 132 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 RTL10Q7L3V2 364 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 SLC7A13Q8TCU3 470 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 VRK1Q99986 396 aaPredicted RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 METTL17Q9H7H0 456 aaPredicted RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 ZNF286AQ9HBT8 521 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 PLCXD1Q9NUJ7 323 aa17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 WSB2Q9NYS7 404 aaPredicted RBP17.26■□□□□ 0.35
SMARCC1-201ENST00000254480 TRAV36DV7A0A075B6V5 113 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 TLCD2A6NGC4 264 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 TP53P04637 393 aaPredicted RBP17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 SNRNP70P08621 437 aaKnown RBP17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 RAB4AP20338 218 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 PIGAP37287 484 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 SGK3Q96BR1 496 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 RAB3CQ96E17 227 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 MYEOVQ96EZ4 313 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 A0A0B4J2A0 478 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 GABRA5P31644 462 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 CST9LP1Q5W188 147 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 IDO2Q6ZQW0 420 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 BCL7CQ8WUZ0 217 aaPredicted RBP17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 SHPKQ9UHJ6 478 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 TAF1P21675 1872 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 SMLR1H3BR10 107 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 HTR2CP28335 458 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 CD1CP29017 333 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 OR14K1Q8NGZ2 314 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 HTD2P86397 168 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 MPEG1Q2M385 716 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 ZNF546Q86UE3 836 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 BORCS7Q96B45 105 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 KCNJ16Q9NPI9 418 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 IGFBP1P08833 259 aaPredicted RBP17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 SSTP61278 116 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 DUSP5Q16690 384 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 HENMT1Q5T8I9 393 aaKnown RBP17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 FUNDC1Q8IVP5 155 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 ABHD4Q8TB40 342 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 RNF128Q8TEB7 428 aa17.25■□□□□ 0.35
SMARCC1-201ENST00000254480 SLC35A1P78382 337 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 NRARPQ7Z6K4 114 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 ZNF419Q96HQ0 510 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms