RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DCAF12L2Q5VW00 463 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 DMKNQ6E0U4 476 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ARHGAP11AQ6P4F7 1023 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 FIGLAQ6QHK4 219 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 PAQR7Q86WK9 346 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 JAGN1Q8N5M9 183 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 TMIEQ8NEW7 156 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 OR5AK2Q8NH90 309 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 RXFP3Q9NSD7 469 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 LRIT1Q9P2V4 623 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 FBXO9Q9UK97 447 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 MRTO4Q9UKD2 239 aaKnown RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 NOP16Q9Y3C1 178 aaKnown RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 WDFY4Q6ZS81 3184 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 C13orf42A0A1B0GVH6 325 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 H0YGG7 62 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 PIN1P1O15428 100 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 CEACAM5P06731 702 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 GMFBP60983 142 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ARF3P61204 181 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 SKP1P63208 163 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 LTBQ06643 244 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF658BQ4V348 819 aaPredicted RBP10.97□□□□□ -0.65
USHBP1-201ENST00000252597 TANGO2Q6ICL3 276 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 DGAT2L6Q6ZPD8 337 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 FOXRED2Q8IWF2 684 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 FGF13Q92913 245 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 BADQ92934 168 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 MENTQ9BUN1 341 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 ALG12Q9BV10 488 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 OR5V1Q9UGF6 321 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 DAPP1Q9UN19 280 aa10.97□□□□□ -0.65
USHBP1-201ENST00000252597 TEX51A0A1B0GUA7 166 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 LILRB3O75022 631 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 CBX7O95931 251 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 S100A11P31949 105 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 GRK6P43250 576 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 TAS2R20P59543 309 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 C1orf53Q5VUE5 145 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 FBXO42Q6P3S6 717 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 ATRAIDQ6UW56 229 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 TMUB2Q71RG4 321 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 KDM8Q8N371 416 aa10.96□□□□□ -0.65
USHBP1-201ENST00000252597 CPNE2Q96FN4 548 aaPredicted RBP10.96□□□□□ -0.65
USHBP1-201ENST00000252597 AHCYL2Q96HN2 611 aaKnown RBP10.96□□□□□ -0.65
USHBP1-201ENST00000252597 C17orf51A8MQB3 221 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 TOR1AO14656 332 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 RNGTTO60942 597 aaKnown RBP10.96□□□□□ -0.66
USHBP1-201ENST00000252597 PTBP1P26599 531 aaKnown RBP eCLIP10.96□□□□□ -0.66
USHBP1-201ENST00000252597 GDI1P31150 447 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 EEF1A1P68104 462 aaKnown RBP10.96□□□□□ -0.66
USHBP1-201ENST00000252597 STK11Q15831 433 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 GSG1LQ6UXU4 331 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 PDZD9Q8IXQ8 264 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 C3orf49Q96BT1 292 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF230Q9UIE0 474 aaPredicted RBP10.96□□□□□ -0.66
USHBP1-201ENST00000252597 GPR160Q9UJ42 338 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 FITM1A5D6W6 292 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 EEF1E1-BLOC1S5C9J1V9 151 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 F5H5P2 479 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 CD3DP04234 171 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF28P17035 718 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 EFNB2P52799 333 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 TFF2Q03403 129 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 DUSP8Q13202 625 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 MLC1Q15049 377 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 ARHGAP11BQ3KRB8 267 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 ARHGAP40Q5TG30 622 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 UNQ6126/PRO20091Q6UXV3 157 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 ADAMTSL4Q6UY14 1074 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 CDRT4Q8N9R6 151 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 MFSD9Q8NBP5 474 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 OR4C3Q8NH37 302 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 FAM3CQ92520 227 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 GAL3ST3Q96A11 431 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 ADAT1Q9BUB4 502 aaKnown RBP10.96□□□□□ -0.66
USHBP1-201ENST00000252597 TRIM2Q9C040 744 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 LYARQ9NX58 379 aaKnown RBP10.96□□□□□ -0.66
USHBP1-201ENST00000252597 CGGBP1Q9UFW8 167 aaPredicted RBP10.96□□□□□ -0.66
USHBP1-201ENST00000252597 ST6GALNAC2Q9UJ37 374 aa10.96□□□□□ -0.66
USHBP1-201ENST00000252597 AMY2AP04746 511 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 SPARCP09486 303 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 SPI1P17947 270 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 SEC61A1P61619 476 aaKnown RBP10.95□□□□□ -0.66
USHBP1-201ENST00000252597 ACTA2P62736 377 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 ACTG2P63267 376 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 HLXQ14774 488 aaPredicted RBP10.95□□□□□ -0.66
USHBP1-201ENST00000252597 OR4C16Q8NGL9 310 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 COX14Q96I36 57 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 CMKLR1Q99788 373 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 SYT4Q9H2B2 425 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 RABL2AQ9UBK7 228 aaPredicted RBP10.95□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF281Q9Y2X9 895 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 TRAV8-7A0A075B6U6 113 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 URADA6NGE7 173 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 RLN2P04090 185 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 OR2T7P0C7T2 308 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 TRAM1Q15629 374 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 AGBL4Q5VU57 503 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms