RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 CFDP00746 253 aaPredicted RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 HPXP02790 462 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 SPI1P17947 270 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 RPL4P36578 427 aaKnown RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 GPR3P46089 330 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 MAP2K6P52564 334 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 PSMA6P60900 246 aaKnown RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 CD226Q15762 336 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ZNF141Q15928 474 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 PYHIN1Q6K0P9 492 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ARHGAP11AQ6P4F7 1023 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 KIAA1324Q6UXG2 1013 aaKnown RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 TMEM184AQ6ZMB5 413 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 CREB3L2Q70SY1 520 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 SLC35F2Q8IXU6 374 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ZNF321PQ8N8H1 164 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 FAM98AQ8NCA5 519 aaKnown RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 OR14A16Q8NHC5 309 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 SLC2A12Q8TD20 617 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 MOGAT1Q96PD6 335 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 TSPAN10Q9H1Z9 355 aaPredicted RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 NCDNQ9UBB6 729 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 PFDN2Q9UHV9 154 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 RCE1Q9Y256 329 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 TNFRSF10CO14798 259 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 ZFPL1O95159 310 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 GABRG2P18507 467 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 SLC6A6P31641 620 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 RBM34P42696 430 aaKnown RBP9.23□□□□□ -0.93
COPB1-201ENST00000249923 CDKN2AP42771 156 aaKnown RBP9.23□□□□□ -0.93
COPB1-201ENST00000249923 EFNA3P52797 238 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 C1orf61Q13536 156 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 GSG1Q2KHT4 349 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 TEX261Q6UWH6 196 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 UNQ9370/PRO34162Q6UXP9 181 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 APOOLQ6UXV4 268 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 CMTM4Q8IZR5 234 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 RELL2Q8NC24 303 aaPredicted RBP9.23□□□□□ -0.93
COPB1-201ENST00000249923 C16orf52Q8NHV5 167 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 SNX33Q8WV41 574 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 C3orf49Q96BT1 292 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 CNN2Q99439 309 aaKnown RBP9.23□□□□□ -0.93
COPB1-201ENST00000249923 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.23□□□□□ -0.93
COPB1-201ENST00000249923 SLC7A5P2Q9GIP4 190 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 NOX4Q9NPH5 578 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 NRIP3Q9NQ35 241 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 DZANK1Q9NVP4 752 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 GNG8Q9UK08 70 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 OR10H1Q9Y4A9 318 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 NPFFR2Q9Y5X5 522 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 U3KQ87 197 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 FAM186AA6NE01 2351 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 WDFY4Q6ZS81 3184 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 A0A087WUJ7 227 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 A0A1B0GTH9 108 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 A0A1W2PPL8 197 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 UBL3O95164 117 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 STARP49675 285 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 CCR4P51679 360 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 ERVK-25P63136 954 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 EGR4Q05215 589 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 CBLN3Q6UW01 205 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 NUDT18Q6ZVK8 323 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 CDK20Q8IZL9 346 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 EXD3Q8N9H8 876 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 OR11G2Q8NGC1 345 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 NXPE2Q96DL1 559 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 MNTQ99583 582 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 TMEM106CQ9BVX2 250 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 SYNDIG1Q9H7V2 258 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 POLE3Q9NRF9 147 aa9.23□□□□□ -0.93
COPB1-201ENST00000249923 OR5K3A6NET4 321 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ZNF593O00488 134 aaPredicted RBP9.22□□□□□ -0.93
COPB1-201ENST00000249923 AK1P00568 194 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 TAS2R43P59537 309 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 LTBQ06643 244 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 SFRP5Q5T4F7 317 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 FAM122BQ7Z309 247 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 SYS1Q8N2H4 156 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 METTL27Q8N6F8 245 aaPredicted RBP9.22□□□□□ -0.93
COPB1-201ENST00000249923 BCORP1Q8N888 145 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 GATSQ8NAP1 163 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 NKD1Q969G9 470 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 WDR89Q96FK6 387 aaPredicted RBP9.22□□□□□ -0.93
COPB1-201ENST00000249923 GPR137Q96N19 417 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 PDCD10Q9BUL8 212 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 RANBP3Q9H6Z4 567 aaPredicted RBP9.22□□□□□ -0.93
COPB1-201ENST00000249923 C14orf105Q9NVL8 296 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 TRBV2A0A0J9YWF9 115 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 NDUFB2O95178 105 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 OR2T7P0C7T2 308 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ADRA2CP18825 462 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ZNF10P21506 573 aaPredicted RBP9.22□□□□□ -0.93
COPB1-201ENST00000249923 DPP4P27487 766 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 DIO1P49895 249 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 PER3P56645 1201 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ACTC1P68032 377 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ACTA1P68133 377 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 TRAM1Q15629 374 aa9.22□□□□□ -0.93
COPB1-201ENST00000249923 ULK3Q6PHR2 472 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms