RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 UBTD1Q9HAC8 227 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 OBP2BQ9NPH6 170 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 CCM2LQ9NUG4 571 aaPredicted RBP11.23□□□□□ -0.61
VPREB3-201ENST00000248948 BEX4Q9NWD9 120 aaPredicted RBP11.23□□□□□ -0.61
VPREB3-201ENST00000248948 TAGLN3Q9UI15 199 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 ITGB1BP2Q9UKP3 347 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 SLC25A15Q9Y619 301 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 PLCE1Q9P212 2302 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 ITPR3Q14573 2671 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 HTR3EA5X5Y0 456 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 RPL36A-HNRNPH2H7BZ11 118 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 KRT33AO76009 404 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 MT-ND1P03886 318 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 CD3EP07766 207 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 ROS1P08922 2347 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 CD53P19397 219 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 PAX7P23759 505 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 CADP27708 2225 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 OR1E2P47887 323 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 IL1RL1Q01638 556 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 BSPH1Q075Z2 132 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 ST3GAL3Q11203 375 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 PMS2P3Q13401 168 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 ACKR1Q16570 336 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 FXNQ16595 210 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 SPATS1Q496A3 300 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 IFI44LQ53G44 452 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 KLHL17Q6TDP4 642 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 KLHL24Q6TFL4 600 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 PXKQ7Z7A4 578 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 LURAP1LQ8IV03 231 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 TMEM123Q8N131 208 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 KDM8Q8N371 416 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 PIGTQ969N2 578 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 FAM162AQ96A26 154 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 HSH2DQ96JZ2 352 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 HS6ST2Q96MM7 605 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 OR2M2Q96R28 347 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 MOV10Q9HCE1 1003 aaKnown RBP11.22□□□□□ -0.61
VPREB3-201ENST00000248948 NANSQ9NR45 359 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 SLC17A5Q9NRA2 495 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 NPAP1Q9NZP6 1156 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
VPREB3-201ENST00000248948 RIMS3Q9UJD0 308 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 RPS6KA6Q9UK32 745 aa11.22□□□□□ -0.61
VPREB3-201ENST00000248948 HIVEP1P15822 2718 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 LRRN3E7EW58 273 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 MS4A18H0YCH9 400 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 KPNA4O00629 521 aaPredicted RBP11.21□□□□□ -0.61
VPREB3-201ENST00000248948 PLPP3O14495 311 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 HS3ST1O14792 307 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF682O95780 498 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 HPRP00739 348 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 SERPINA1P01009 418 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 ASAH2BP0C7U1 165 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 HSD17B1P14061 328 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 CBLP22681 906 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 MNAT1P51948 309 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.61
VPREB3-201ENST00000248948 ZP4Q12836 540 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 PIN1Q13526 163 aaPredicted RBP11.21□□□□□ -0.61
VPREB3-201ENST00000248948 KRT72Q14CN4 511 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 MS4A18Q3C1V0 323 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 HMBOX1Q6NT76 420 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 C16orf89Q6UX73 402 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 TMEM108Q6UXF1 575 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 SLC46A3Q7Z3Q1 461 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 NANOGNBQ7Z5D8 188 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 VTCN1Q7Z7D3 282 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF611Q8N823 705 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 OR1K1Q8NGR3 316 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 MAGEE2Q8TD90 523 aaPredicted RBP11.21□□□□□ -0.61
VPREB3-201ENST00000248948 TMEM255BQ8WV15 326 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 TMEM239Q8WW34 195 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 RADILQ96JH8 1075 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 CCT8L2Q96SF2 557 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 CCL19Q99731 98 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 MEPEQ9NQ76 525 aaPredicted RBP11.21□□□□□ -0.61
VPREB3-201ENST00000248948 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 ADA2Q9NZK5 511 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 MAGEL2Q9UJ55 1249 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 A4GNTQ9UNA3 340 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 SAMD4AQ9UPU9 718 aaKnown RBP11.21□□□□□ -0.61
VPREB3-201ENST00000248948 MGAT4BQ9UQ53 548 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 MED31Q9Y3C7 131 aa11.21□□□□□ -0.61
VPREB3-201ENST00000248948 FLNAP21333 2647 aaKnown RBP11.2□□□□□ -0.62
VPREB3-201ENST00000248948 ARPC4-TTLL3A0A0A6YYG9 625 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 UPK3AO75631 287 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 OR6A2O95222 327 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 CH25HO95992 272 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 WNT11O96014 354 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 PTAFRP25105 342 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 UGT2B15P54855 530 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 ROR2Q01974 943 aaKnown RBP11.2□□□□□ -0.62
VPREB3-201ENST00000248948 SAMD4BQ5PRF9 694 aaKnown RBP11.2□□□□□ -0.62
VPREB3-201ENST00000248948 C9orf135Q5VTT2 229 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 ALKBH2Q6NS38 261 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 LINGO2Q7L985 606 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 NKAIN4Q8IVV8 208 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms