RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CHST2Q9Y4C5 530 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 EPPINO95925 133 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 MAKP20794 623 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 IL11P20809 199 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR2T4Q8NH00 348 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 FNDC8Q8TC99 324 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 TAAR6Q96RI8 345 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 EMC6Q9BV81 110 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 TPRKBQ9Y3C4 175 aa9.99□□□□□ -0.81
TNFAIP3-201ENST00000237289 TEX13CA0A0J9YWL9 993 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 TMIGD3P0DMS9 266 aaPredicted RBP9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 MYL12AP19105 171 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 IL32P24001 234 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 CRABP1P29762 137 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 GIPRP48546 466 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 DAPP51397 102 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 AQP4P55087 323 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF544Q6NX49 715 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 THAP5Q7Z6K1 395 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 BPIFB6Q8NFQ5 453 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 POC1BQ8TC44 478 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 SNRNP27Q8WVK2 155 aaKnown RBP9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 MOGAT1Q96PD6 335 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 VNN3Q9NY84 501 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 N6AMT1Q9Y5N5 214 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 NBASA2RRP1 2371 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR6C65A6NJZ3 312 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 C6orf52Q5T4I8 152 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 TMEM236Q5W0B7 351 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZDHHC11Q9H8X9 412 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 ARRDC5A6NEK1 342 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 H0YC42 278 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 FMO3P31513 532 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 RPL27P61353 136 aaKnown RBP9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 PTGES3Q15185 160 aaKnown RBP9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 PGGHGQ32M88 737 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 SLC25A53Q5H9E4 307 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF227Q86WZ6 799 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 SLC29A1Q99808 456 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 PROK2Q9HC23 129 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF175Q9Y473 711 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF587BE7ETH6 402 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 PTGES3LE9PB15 166 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 IDH3BO43837 385 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 IGHV3-9P01782 118 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 BMP5P22003 454 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 C19orf57Q0VDD7 668 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 ACKR1Q16570 336 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 OGFRL1Q5TC84 451 aaPredicted RBP9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 C9orf135Q5VTT2 229 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 KLHL17Q6TDP4 642 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 CXXC5Q7LFL8 322 aaKnown RBP9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 PXKQ7Z7A4 578 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 FJX1Q86VR8 437 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 CYB561A3Q8NBI2 242 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 SDR9C7Q8NEX9 313 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR8J1Q8NGP2 316 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR6S1Q8NH40 331 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 TUBA1CQ9BQE3 449 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 MED29Q9NX70 200 aa9.98□□□□□ -0.81
TNFAIP3-201ENST00000237289 ADAM11O75078 769 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 GLSO94925 669 aaPredicted RBP9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 PLP2Q04941 152 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 PMPCAQ10713 525 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 STK11Q15831 433 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 HYAL4Q2M3T9 481 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 RPTNQ6XPR3 784 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF620Q6ZNG0 422 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 FAM57AQ8TBR7 257 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 PRSS27Q9BQR3 290 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 UBQLN3Q9H347 655 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 RPRD1BQ9NQG5 326 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 PNPLA3Q9NST1 481 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 HSPB2A8KAH6 182 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 CASKO14936 926 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 KHDRBS3O75525 346 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 YES1P07947 543 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 HSF2Q03933 536 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 HSPB2Q16082 182 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 IQCCQ4KMZ1 466 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 RNFT1Q5M7Z0 435 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 TMEM179BQ7Z7N9 219 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 CA5BP1Q8WTZ4 195 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 Q96M85 177 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 UCN2Q96RP3 112 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 SF3B5Q9BWJ5 86 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 MEPEQ9NQ76 525 aaPredicted RBP9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 SLC35F4A4IF30 521 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 SLC16A7O60669 478 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 NTN1O95631 604 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF708P17019 499 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 OMPP47874 163 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 BLVRAP53004 296 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 CDH11P55287 796 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR9K2Q8NGE7 335 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 NANOS1Q8WY41 292 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 ADAD1Q96M93 576 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 TXNIPQ9H3M7 391 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 RAB26Q9ULW5 256 aa9.97□□□□□ -0.81
TNFAIP3-201ENST00000237289 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms