RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 TPRA1Q86W33 373 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 SMIM4Q8WVI0 70 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 PTCHD1Q96NR3 888 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 CNTNAP3BQ96NU0 1288 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 SSX3Q99909 188 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 MRPS30Q9NP92 439 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 COMMD9Q9P000 198 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 ZNF346Q9UL40 294 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 ACSM1Q08AH1 577 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 DYRK1AQ13627 763 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 MTSS1LQ765P7 747 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 SFTPA1Q8IWL2 248 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 GTPBP8Q8N3Z3 284 aaPredicted RBP13□□□□□ -0.33
PCDHB3-201ENST00000231130 SYNPRQ8TBG9 265 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 THEM6Q8WUY1 208 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 TCTEX1D2Q8WW35 142 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 CLDND1Q9NY35 253 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 FAM96BQ9Y3D0 163 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 A0A0A6YYD5 115 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 NFATC1O95644 943 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 ATP1B1P05026 303 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 CD2P06729 351 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 FBXO45P0C2W1 286 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 TMIGD3P0DMS9 266 aaPredicted RBP13□□□□□ -0.33
PCDHB3-201ENST00000231130 PRKAR1BP31321 381 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 RPL4P36578 427 aaKnown RBP13□□□□□ -0.33
PCDHB3-201ENST00000231130 PTH2RP49190 550 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 CASP6P55212 293 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 SKP2Q13309 424 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 KCNAB1Q14722 419 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 TGIF1Q15583 401 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 OR1Q1Q15612 314 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 NCMAPQ5T1S8 102 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 STPG1Q5TH74 334 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 SPICQ8N5J4 248 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 OR7G2Q8NG99 324 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 OR10R2Q8NGX6 335 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 AKR7LQ8NHP1 331 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 TSPAN10Q9H1Z9 355 aaPredicted RBP13□□□□□ -0.33
PCDHB3-201ENST00000231130 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
PCDHB3-201ENST00000231130 TAS2R5Q9NYW4 299 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 KLHL9Q9P2J3 617 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 OR6C76A6NM76 312 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 DDX6P26196 483 aaKnown RBP eCLIP13□□□□□ -0.33
PCDHB3-201ENST00000231130 GPX4P36969 197 aaPredicted RBP13□□□□□ -0.33
PCDHB3-201ENST00000231130 MRPL2Q5T653 305 aaKnown RBP13□□□□□ -0.33
PCDHB3-201ENST00000231130 FAM71CQ8NEG0 241 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 KISS1RQ969F8 398 aaPredicted RBP13□□□□□ -0.33
PCDHB3-201ENST00000231130 ARRDC3Q96B67 414 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 MRGPRX3Q96LB0 322 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 ARHGDIGQ99819 225 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 ADGRL4Q9HBW9 690 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 RASL12Q9NYN1 266 aa13□□□□□ -0.33
PCDHB3-201ENST00000231130 LOC100509620A0A075B734 347 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 OR2T1O43869 369 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 ARL6IP5O75915 188 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 ASGR2P07307 311 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 UBBP0CG47 229 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 UBCP0CG48 685 aaKnown RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 FRKP42685 505 aaPredicted RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 RPS27AP62979 156 aaKnown RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 UBA52P62987 128 aaKnown RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 DUSP5Q16690 384 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 RNF212Q495C1 297 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 DVL3Q92997 716 aaPredicted RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 MED17Q9NVC6 651 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 ADAM18Q9Y3Q7 739 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 IGKV1-8A0A0C4DH67 115 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 GPR37O15354 613 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 MAS1P04201 325 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 LIPCP11150 499 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 F3P13726 295 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 PRF1P14222 555 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 NRG3P56975 720 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 SNRPNP63162 240 aaKnown RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 SRSF3P84103 164 aaKnown RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 REEP5Q00765 189 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 ADAM5Q6NVV9 412 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 NDUFAF7Q7L592 441 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 RANBP3LQ86VV4 465 aaPredicted RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 C12orf40Q86WS4 652 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 GJD3Q8N144 294 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 OR2AK2Q8NG84 335 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 OR5K2Q8NHB8 316 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 PNPLA2Q96AD5 504 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 PELI1Q96FA3 418 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 LURAP1Q96LR2 239 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 VRK1Q99986 396 aaPredicted RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 DPEP2Q9H4A9 486 aa12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 ASCC3Q8N3C0 2202 aaKnown RBP12.99□□□□□ -0.33
PCDHB3-201ENST00000231130 RANBP2P49792 3224 aaKnown RBP12.98□□□□□ -0.33
PCDHB3-201ENST00000231130 OR2M5A3KFT3 312 aa12.98□□□□□ -0.33
PCDHB3-201ENST00000231130 HMSDA8MTL9 139 aa12.98□□□□□ -0.33
PCDHB3-201ENST00000231130 EEF1A1P68104 462 aaKnown RBP12.98□□□□□ -0.33
PCDHB3-201ENST00000231130 SREBF2Q12772 1141 aa12.98□□□□□ -0.33
PCDHB3-201ENST00000231130 TRMT12Q53H54 448 aaKnown RBP12.98□□□□□ -0.33
PCDHB3-201ENST00000231130 EEF1A1P5Q5VTE0 462 aa12.98□□□□□ -0.33
PCDHB3-201ENST00000231130 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms