RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 RRAGCQ9HB90 399 aa7.69□□□□□ -1.18
SPARC-201ENST00000231061 NPDC1Q9NQX5 325 aaPredicted RBP7.69□□□□□ -1.18
SPARC-201ENST00000231061 FBXL12Q9NXK8 326 aa7.69□□□□□ -1.18
SPARC-201ENST00000231061 CRLS1Q9UJA2 301 aa7.69□□□□□ -1.18
SPARC-201ENST00000231061 ZNF490Q9ULM2 529 aaPredicted RBP7.69□□□□□ -1.18
SPARC-201ENST00000231061 CCL27Q9Y4X3 112 aa7.69□□□□□ -1.18
SPARC-201ENST00000231061 COL4A4P53420 1690 aaPredicted RBP7.69□□□□□ -1.18
SPARC-201ENST00000231061 DOCK4Q8N1I0 1966 aa7.69□□□□□ -1.18
SPARC-201ENST00000231061 SCN10AQ9Y5Y9 1956 aa7.69□□□□□ -1.18
SPARC-201ENST00000231061 BNIP3LO60238 219 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SLC25A14O95258 325 aaPredicted RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 CR2P20023 1033 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 CNR2P34972 360 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 CEACAM6P40199 344 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 TMBIM6P55061 237 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 CSNK1G2P78368 415 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 BATFQ16520 125 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SAMD13Q5VXD3 122 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 NPAS3Q8IXF0 933 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 GHDCQ8N2G8 530 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 C2orf73Q8N5S3 287 aaPredicted RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 C11orf42Q8N5U0 333 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 FAM46DQ8NEK8 389 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 OR8D4Q8NGM9 314 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 CMTM7Q96FZ5 175 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 ZNF583Q96ND8 569 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 OR52E6Q96RD3 313 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 MTERF1Q99551 399 aaKnown RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 MRPL13Q9BYD1 178 aaKnown RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 KLHL28Q9NXS3 571 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 PDE10AQ9Y233 779 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 RASD1Q9Y272 281 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 A3GALT2U3KPV4 340 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 MGAT4DA6NG13 374 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 AGAP5A6NIR3 686 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 ZNF705EA8MWA4 302 aaPredicted RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 UPK3BL1B0FP48 263 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 UPK3BL2E5RIL1 263 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 TBL1XO60907 577 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 RFPL3O75679 317 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 GLCEO94923 617 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 METTL15P1P0C7V9 234 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 PET100P0DJ07 73 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 ZNF14P17017 642 aaPredicted RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 S100GP29377 79 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 CA5AP35218 305 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 GDNFP39905 211 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SLC37A1P57057 533 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SHC2P98077 582 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 TRAF3Q13114 568 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 CPSF6Q16630 551 aaKnown RBP eCLIP7.68□□□□□ -1.18
SPARC-201ENST00000231061 C9orf50Q5SZB4 431 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 APCDD1Q8J025 514 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 ZNF610Q8N9Z0 462 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 ZSCAN4Q8NAM6 433 aaPredicted RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 UXS1Q8NBZ7 420 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 OR6N1Q8NGY5 312 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 RHOXF1Q8NHV9 184 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 C4orf36Q96KX1 117 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SLC38A3Q99624 504 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SLITRK2Q9H156 845 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 IKZF5Q9H5V7 419 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 LRTM1Q9HBL6 345 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 FARSAQ9Y285 508 aaKnown RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 PCDHB7Q9Y5E2 793 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 A0A1W2PPE3 182 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 IFNL4K9M1U5 179 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 UPK1AO00322 258 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 ZNF682O95780 498 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 C1QCP02747 245 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 AGXTP21549 392 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 PIGAP37287 484 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 LIPAP38571 399 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 CTSCP53634 463 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 PNLIPRP2P54317 469 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 MC2RQ01718 297 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 RPE65Q16518 533 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 NKG7Q16617 165 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 AGBL4Q5VU57 503 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 CST9Q5W186 159 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SBSNQ6UWP8 590 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SHFQ7M4L6 423 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 FAM58AQ8N1B3 248 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SLC22A17Q8WUG5 538 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 SENP5Q96HI0 755 aaPredicted RBP7.68□□□□□ -1.18
SPARC-201ENST00000231061 HHIPL1Q96JK4 782 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 FAM83DQ9H4H8 585 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 ZDHHC6Q9H6R6 413 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 C1orf109Q9NX04 203 aa7.68□□□□□ -1.18
SPARC-201ENST00000231061 E5RGE8 158 aa7.67□□□□□ -1.18
SPARC-201ENST00000231061 LRATO95237 230 aa7.67□□□□□ -1.18
SPARC-201ENST00000231061 CLDN9O95484 217 aa7.67□□□□□ -1.18
SPARC-201ENST00000231061 CD2P06729 351 aa7.67□□□□□ -1.18
SPARC-201ENST00000231061 CASRP41180 1078 aa7.67□□□□□ -1.18
SPARC-201ENST00000231061 MRPL19P49406 292 aaKnown RBP7.67□□□□□ -1.18
SPARC-201ENST00000231061 TNFSF10P50591 281 aa7.67□□□□□ -1.18
SPARC-201ENST00000231061 ZNF155Q12901 538 aaPredicted RBP7.67□□□□□ -1.18
SPARC-201ENST00000231061 MAD2L1Q13257 205 aaPredicted RBP7.67□□□□□ -1.18
SPARC-201ENST00000231061 MICBQ29980 383 aa7.67□□□□□ -1.18
SPARC-201ENST00000231061 TMPRSS11FQ6ZWK6 438 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms