RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SHPKQ9UHJ6 478 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 CBLCQ9ULV8 474 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 LSM5Q9Y4Y9 91 aaKnown RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF318Q5VUA4 2279 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 ANKRD31Q8N7Z5 1873 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 NAP1L6A6NFF2 107 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 CRTAPO75718 401 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-201ENST00000226574 TRAPPC2P0DI81 140 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 TRAPPC2BP0DI82 140 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 CXCL3P19876 107 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 PGCP20142 388 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 CDK2P24941 298 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 CLRN1P58418 232 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 FAM69BQ5VUD6 431 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 TMEM156Q8N614 296 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 ZBTB44Q8NCP5 570 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 NXF5Q9H1B4 397 aaKnown RBP12.66□□□□□ -0.38
NFKB1-201ENST00000226574 IL23AQ9NPF7 189 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 V9GYH0 126 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 SEMA4FO95754 770 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 TIMP1P01033 207 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 ATF1P18846 271 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 TLE3Q04726 772 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 ZP2Q05996 745 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 KIR2DS3Q14952 304 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 OR7A5Q15622 319 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 CD276Q5ZPR3 534 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 MFSD9Q8NBP5 474 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 SELENOIQ9C0D9 397 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 EPHX3Q9H6B9 360 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 TESQ9UGI8 421 aaKnown RBP12.66□□□□□ -0.38
NFKB1-201ENST00000226574 DAPP1Q9UN19 280 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF337Q9Y3M9 751 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 NPFFR2Q9Y5X5 522 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 COL11A1P12107 1806 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-201ENST00000226574 A0A1B0GTH9 108 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 EIF5AP63241 154 aaKnown RBP12.66□□□□□ -0.38
NFKB1-201ENST00000226574 IRF3Q14653 427 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 RBMS2Q15434 407 aaKnown RBP12.66□□□□□ -0.38
NFKB1-201ENST00000226574 DEFB133Q30KQ1 61 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 THSD4Q6ZMP0 1018 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 OR6V1Q8N148 313 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 FAM3CQ92520 227 aa12.66□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF850A8MQ14 1090 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 GPR171O14626 319 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF16P17020 682 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-201ENST00000226574 CSNK2A1P68400 391 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-201ENST00000226574 LHX8Q68G74 356 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 CSNK2A3Q8NEV1 391 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 OR4D9Q8NGE8 314 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 PHB2Q99623 299 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 CMC2Q9NRP2 79 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 SDHAF2Q9NX18 166 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 SERTAD3Q9UJW9 196 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 B3GALT1Q9Y5Z6 326 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 GCM2O75603 506 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-201ENST00000226574 TRAPPC6AO75865 159 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 RORAP35398 523 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 HMGA2P52926 109 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 IFITM2Q01629 132 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 Q499Y3 187 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 PHF19Q5T6S3 580 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 PRAMEF8Q5VWM4 474 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 PRAMEF7Q5VXH5 474 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 LRRC69Q6ZNQ3 347 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 PM20D2Q8IYS1 436 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 RNF113BQ8IZP6 322 aaKnown RBP12.65□□□□□ -0.38
NFKB1-201ENST00000226574 LINC01555Q8NAE3 123 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 OR10R2Q8NGX6 335 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 PGAM5Q96HS1 289 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 NARFLQ9H6Q4 476 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 EMC7Q9NPA0 242 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 SBF2Q86WG5 1849 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 GPRIN2O60269 458 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 LDOC1O95751 146 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-201ENST00000226574 CSF1P09603 554 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 VEGFBP49765 207 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 PCBP3P57721 371 aaKnown RBP12.65□□□□□ -0.38
NFKB1-201ENST00000226574 STEAP1BQ6NZ63 245 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 TMEM88Q6PEY1 159 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 ABHD12BQ7Z5M8 362 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-201ENST00000226574 MARCH3Q86UD3 253 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 INPP5EQ9NRR6 644 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 C2orf42Q9NWW7 574 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF346Q9UL40 294 aaKnown RBP12.65□□□□□ -0.38
NFKB1-201ENST00000226574 EMC9Q9Y3B6 208 aa12.65□□□□□ -0.38
NFKB1-201ENST00000226574 DVL2O14641 736 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 ERCC1P07992 297 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-201ENST00000226574 ZNF41P51814 821 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-201ENST00000226574 VAMP2P63027 116 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 POU3F1Q03052 451 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-201ENST00000226574 SRSF5Q13243 272 aaKnown RBP12.64□□□□□ -0.39
NFKB1-201ENST00000226574 MFSD13AQ14CX5 517 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 MED25Q71SY5 747 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 CHAC2Q8WUX2 184 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 RABL2AQ9UBK7 228 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms