RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 HIST3H2AQ7L7L0 130 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 SLC36A1Q7Z2H8 476 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 GLB1L2Q8IW92 636 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 OR51A4Q8NGJ6 313 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 NT5CQ8TCD5 201 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 SPPL3Q8TCT6 385 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
NUP88-201ENST00000225696 HIST1H2ACQ93077 130 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 HAVCR1Q96D42 359 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 BAIAP2Q9UQB8 552 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 A0A1W2PQU0 124 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 NAP1L6A6NFF2 107 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 GPR89AB7ZAQ6 455 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 DCTN6O00399 190 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 CYR61O00622 381 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 HCRTR1O43613 425 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 NDUFB2O95178 105 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 CBX7O95931 251 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 CTSBP07858 339 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 GPR89BP0CG08 455 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 GABRA1P14867 456 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 TLX1P31314 330 aaPredicted RBP11.33□□□□□ -0.6
NUP88-201ENST00000225696 CDKN2AP42771 156 aaKnown RBP11.33□□□□□ -0.6
NUP88-201ENST00000225696 AP3S2P59780 193 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 PSG6Q00889 435 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 BAMBIQ13145 260 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 TFAP2EQ6VUC0 442 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 DND1Q8IYX4 353 aaKnown RBP11.33□□□□□ -0.6
NUP88-201ENST00000225696 MUC20Q8N307 709 aaPredicted RBP11.33□□□□□ -0.6
NUP88-201ENST00000225696 RELL2Q8NC24 303 aaPredicted RBP11.33□□□□□ -0.6
NUP88-201ENST00000225696 OR52R1Q8NGF1 315 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 OR4C16Q8NGL9 310 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 OR1S1Q8NH92 325 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 RPS4Y2Q8TD47 263 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 PNPLA2Q96AD5 504 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 CMTM3Q96MX0 182 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 UTP23Q9BRU9 249 aaKnown RBP11.33□□□□□ -0.6
NUP88-201ENST00000225696 KIR3DX1Q9H7L2 352 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 FRRS1LQ9P0K9 344 aa11.33□□□□□ -0.6
NUP88-201ENST00000225696 TMEM72A0PK05 275 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 POM121BA6NF01 834 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 OR2W5A6NFC9 320 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 H0Y8X5 98 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 TOR1AO14656 332 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 B3GALNT1O75752 331 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 MAS1P04201 325 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 RLN1P04808 185 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 CTNNB1P35222 781 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 ARHGDIBP52566 201 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 ART1P52961 327 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
NUP88-201ENST00000225696 IL10RAQ13651 578 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 PCGF3Q3KNV8 242 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 ZNF660Q6AZW8 331 aaPredicted RBP11.32□□□□□ -0.6
NUP88-201ENST00000225696 OVCH2Q7RTZ1 564 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 SFTPA2Q8IWL1 248 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 OR10G6Q8NH81 332 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 DVL3Q92997 716 aaPredicted RBP11.32□□□□□ -0.6
NUP88-201ENST00000225696 MIB2Q96AX9 1013 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 STACQ99469 402 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 TMPRSS13Q9BYE2 586 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 ULBP3Q9BZM4 244 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 NMNAT2Q9BZQ4 307 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 SRMSQ9H3Y6 488 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 CD93Q9NPY3 652 aa11.32□□□□□ -0.6
NUP88-201ENST00000225696 AKAP7Q9P0M2 348 aaPredicted RBP11.32□□□□□ -0.6
NUP88-201ENST00000225696 TUBAL3A6NHL2 446 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 ACOT7O00154 380 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 GOSR2O14653 212 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 PDCD5O14737 125 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 CTNSO60931 367 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 UPK3AO75631 287 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 GPR75O95800 540 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 RLN2P04090 185 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 FGF2P09038 288 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 LSSP48449 732 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 MECP2P51608 486 aaKnown RBP11.31□□□□□ -0.6
NUP88-201ENST00000225696 PGDP52209 483 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 ADPRHP54922 357 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 SGCGQ13326 291 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 LRRTM1Q86UE6 522 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 TMPRSS12Q86WS5 348 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 BVESQ8NE79 360 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 FGF13Q92913 245 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 AIFM2Q9BRQ8 373 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 APOOQ9BUR5 198 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 MRM2Q9UI43 246 aaKnown RBP11.31□□□□□ -0.6
NUP88-201ENST00000225696 F5P12259 2224 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 A0A087WV62 115 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 SNRPGP15A8MWD9 76 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 H7C1C5 153 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 GPRIN2O60269 458 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 RP2O75695 350 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 GLSO94925 669 aaPredicted RBP11.31□□□□□ -0.6
NUP88-201ENST00000225696 KDM4BO94953 1096 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 SPDEFO95238 335 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 KAT7O95251 611 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 GPANK1O95872 356 aa11.31□□□□□ -0.6
NUP88-201ENST00000225696 IL5P05113 134 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms