RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SVILO95425 2214 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 IGKV3D-15A0A087WSY6 115 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 IGHV3-15A0A0B4J1V0 119 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 LOC100130705A0A1B0GUX0 176 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 IMPA2O14732 288 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 WDR1O75083 606 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 OR6A2O95222 327 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 TXNDC12O95881 172 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 F13BP05160 661 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 HOXD4P09016 255 aaPredicted RBP12.52□□□□□ -0.41
SEC61B-201ENST00000223641 HLA-DOBP13765 273 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 GABRA1P14867 456 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 PTGER4P35408 488 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 HSPA13P48723 471 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 CTXN1P60606 82 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 EFNB1P98172 346 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 GINS1Q14691 196 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 PON3Q15166 354 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF362Q5T0B9 420 aaPredicted RBP12.52□□□□□ -0.41
SEC61B-201ENST00000223641 TMEM236Q5W0B7 351 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 TTC23Q5W5X9 447 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 C12orf73Q69YU5 71 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 GFRALQ6UXV0 394 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 ST6GALNAC3Q8NDV1 305 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 ANKK1Q8NFD2 765 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 OR2T33Q8NG76 320 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 OR52L1Q8NGH7 329 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 OR5M9Q8NGP3 310 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 FNDC9Q8TBE3 224 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 ROBO4Q8WZ75 1007 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 BBC3Q96PG8 261 aaPredicted RBP12.52□□□□□ -0.41
SEC61B-201ENST00000223641 TXNIPQ9H3M7 391 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 RNF122Q9H9V4 155 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 CALHM2Q9HA72 323 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 INIPQ9NRY2 104 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 TBC1D23Q9NUY8 699 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 MCTS1Q9ULC4 181 aaKnown RBP12.52□□□□□ -0.41
SEC61B-201ENST00000223641 BAIAP2Q9UQB8 552 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 ARHGAP21Q5T5U3 1957 aa12.52□□□□□ -0.41
SEC61B-201ENST00000223641 KALRNO60229 2985 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 CD8B2A6NJW9 211 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 C11orf98E9PRG8 122 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 RNF13O43567 381 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 TRAF3IP2O43734 574 aaPredicted RBP12.51□□□□□ -0.41
SEC61B-201ENST00000223641 IDH3BO43837 385 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 AQP8O94778 261 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 SYNGR4O95473 234 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 TGM6O95932 706 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 AHCYP23526 432 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 POU1F1P28069 291 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 GGT2P36268 569 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 CAPGP40121 348 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 SMSP52788 366 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 SF3B4Q15427 424 aaKnown RBP eCLIP12.51□□□□□ -0.418e-9■■■■□ 23.2
SEC61B-201ENST00000223641 PGGHGQ32M88 737 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 ACSF3Q4G176 576 aaPredicted RBP12.51□□□□□ -0.41
SEC61B-201ENST00000223641 CLEC12AQ5QGZ9 265 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 ARMC4Q5T2S8 1044 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 USP51Q70EK9 711 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 CREB3L2Q70SY1 520 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 CHMP1BQ7LBR1 199 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 IGFN1Q86VF2 1251 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 ZGRF1Q86YA3 2104 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 CCDC71Q8IV32 467 aaPredicted RBP12.51□□□□□ -0.41
SEC61B-201ENST00000223641 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF570Q96NI8 536 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 TACO1Q9BSH4 297 aaKnown RBP12.51□□□□□ -0.41
SEC61B-201ENST00000223641 KATNB1Q9BVA0 655 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 NDEL1Q9GZM8 345 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 BCO1Q9HAY6 547 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 GP6Q9HCN6 339 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 RAB26Q9ULW5 256 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 ADAM18Q9Y3Q7 739 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 SPTA1P02549 2419 aa12.51□□□□□ -0.41
SEC61B-201ENST00000223641 SMG1Q96Q15 3661 aaKnown RBP12.5□□□□□ -0.41
SEC61B-201ENST00000223641 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 FIGNL2A6NMB9 653 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 KDM4EB2RXH2 506 aaPredicted RBP12.5□□□□□ -0.41
SEC61B-201ENST00000223641 PPP1R3DO95685 299 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 TPOP07202 933 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF43P17038 809 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 SDHAP31040 664 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 GRK5P34947 590 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 RPL4P36578 427 aaKnown RBP12.5□□□□□ -0.41
SEC61B-201ENST00000223641 RPS6KA3P51812 740 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 RASGEF1BQ0VAM2 473 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 IL18R1Q13478 541 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 RNPS1Q15287 305 aaKnown RBP12.5□□□□□ -0.41
SEC61B-201ENST00000223641 ACKR1Q16570 336 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 GPR139Q6DWJ6 353 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 RTL6Q6ICC9 239 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 CD163Q86VB7 1156 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 DOLPP1Q86YN1 238 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 UEVLDQ8IX04 471 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 IQCF1Q8N6M8 205 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 OR9K2Q8NGE7 335 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF519Q8TB69 540 aa12.5□□□□□ -0.41
SEC61B-201ENST00000223641 ABHD3Q8WU67 409 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms