RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 B4GAT1O43505 415 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 TNFSF12O43508 249 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 MAKP20794 623 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 PDLIM3Q53GG5 364 aaPredicted RBP17.5■□□□□ 0.39
SMPD3-201ENST00000219334 KCNG3Q8TAE7 436 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 CHTF18Q8WVB6 975 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 NOX4Q9NPH5 578 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 MYO10Q9HD67 2058 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 SLC5A10A0PJK1 596 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 ZNF732B4DXR9 585 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 NRG2O14511 850 aaPredicted RBP17.49■□□□□ 0.39
SMPD3-201ENST00000219334 HSPB6O14558 160 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 SPARTQ8N0X7 666 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 OR2B2Q9GZK3 357 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 CNTRLQ7Z7A1 2325 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 MYH10P35580 1976 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 LRIT2A6NDA9 550 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 APOBEC1P41238 236 aaKnown RBP17.49■□□□□ 0.39
SMPD3-201ENST00000219334 VEGFCP49767 419 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 GPR85P60893 370 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 ACTBL2Q562R1 376 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 STEAP3Q658P3 488 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 LINC00346Q8IVM7 164 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 SLC16A11Q8NCK7 471 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 OR2T11Q8NH01 316 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 TFAP2CQ92754 450 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 DAPP1Q9UN19 280 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 MAP1BP46821 2468 aaKnown RBP17.49■□□□□ 0.39
SMPD3-201ENST00000219334 SERPINA7P05543 415 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 SLC19A1P41440 591 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 DEFB109BQ30KR1 87 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 ZNF691Q5VV52 312 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 MAML2Q8IZL2 1156 aaPredicted RBP17.49■□□□□ 0.39
SMPD3-201ENST00000219334 OR4M1Q8NGD0 313 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 STT3BQ8TCJ2 826 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 GGHQ92820 318 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 SERTAD4Q9NUC0 356 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 SLC23A2Q9UGH3 650 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 MRPS28Q9Y2Q9 187 aaKnown RBP17.49■□□□□ 0.39
SMPD3-201ENST00000219334 PMS2P1A4D2B8 440 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 BTBD17A6NE02 478 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 ZNF891A8MT65 544 aaPredicted RBP17.49■□□□□ 0.39
SMPD3-201ENST00000219334 LIPCP11150 499 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 P2RX1P51575 399 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 SLC10A1Q14973 349 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 PGAP1Q75T13 922 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 PRICKLE2Q7Z3G6 844 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 YRDCQ86U90 279 aaKnown RBP17.49■□□□□ 0.39
SMPD3-201ENST00000219334 GLB1L2Q8IW92 636 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 LIPHQ8WWY8 451 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 ADAMTSL3P82987 1691 aa17.49■□□□□ 0.39
SMPD3-201ENST00000219334 B3GALT4O96024 378 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 FAM71E1Q6IPT2 247 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 Q6ZSR9 355 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 LRRC28Q86X40 367 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-201ENST00000219334 BPIFB2Q8N4F0 458 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 LTB4R2Q9NPC1 389 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 C6orf183Q5T699 404 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 OR52W1Q6IF63 320 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 FCRLAQ7L513 359 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 LSMEM2Q8N112 164 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 PATE1Q8WXA2 126 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 RAB3CQ96E17 227 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 GFOD1Q9NXC2 390 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 RGS11O94810 467 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 HES1Q14469 280 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 SFRP5Q5T4F7 317 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 TBPL2Q6SJ96 375 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 ZNF679Q8IYX0 411 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 OLFM2O95897 454 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 GAB1Q13480 694 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 TBCEQ15813 527 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-201ENST00000219334 SYT13Q7L8C5 426 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 OR5D18Q8NGL1 313 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 ZFAND2BQ8WV99 257 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 NDRG4Q9ULP0 352 aaKnown RBP17.48■□□□□ 0.39
SMPD3-201ENST00000219334 GABRPO00591 440 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 TAPBPO15533 448 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 FZD7O75084 574 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 VAMP5O95183 116 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 GLB1P16278 677 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 HTR2CP28335 458 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 C21orf33P30042 268 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-201ENST00000219334 FOXK2Q01167 660 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 FOXC1Q12948 553 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 MRPL58Q14197 206 aaKnown RBP17.48■□□□□ 0.39
SMPD3-201ENST00000219334 OR2G6Q5TZ20 316 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 GDF7Q7Z4P5 450 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 B3GNT8Q7Z7M8 397 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 C12orf45Q8N5I9 185 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-201ENST00000219334 MALSU1Q96EH3 234 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 TSSK2Q96PF2 358 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 SELENOIQ9C0D9 397 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 PPA2Q9H2U2 334 aa17.48■□□□□ 0.39
SMPD3-201ENST00000219334 FIGNL2A6NMB9 653 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 HPGDSO60760 199 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 NSA2O95478 260 aaKnown RBP17.47■□□□□ 0.39
SMPD3-201ENST00000219334 SCCPDHQ8NBX0 429 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 MS4A6EQ96DS6 147 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms