RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 A0A087WV48 116 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 CHP2O43745 196 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ICOSLGO75144 302 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ZNF780AO75290 641 aaPredicted RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 HOXD4P09016 255 aaPredicted RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 CPEP16870 476 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 AFF3P51826 1226 aaKnown RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 OR2B6P58173 313 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 HSD11B2P80365 405 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 PRKCDQ05655 676 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 PUDPQ08623 228 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 PYDC2Q56P42 97 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 HLA-DQA1Q5Y7H0 255 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 GUSBP11Q6P575 273 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 SLC23A3Q6PIS1 610 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 KDM8Q8N371 416 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ZNF511Q8NB15 262 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 C17orf47Q8NEP4 570 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 CEP76Q8TAP6 659 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 SLC2A12Q8TD20 617 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ASB15Q8WXK1 588 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 CCDC74AQ96AQ1 378 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 Q96M85 177 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 C1QTNF6Q9BXI9 259 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 PPIL3Q9H2H8 161 aaKnown RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 SMOC1Q9H4F8 434 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 RANGRFQ9HD47 186 aaPredicted RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 ACOXLQ9NUZ1 547 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ASB6Q9NWX5 421 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ASH2LQ9UBL3 628 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 FER1L5A0AVI2 2057 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 ANKRD61A6NGH8 418 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 PATE3B3GLJ2 98 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 PROB1E7EW31 1015 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 GABRPO00591 440 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 HCN1O60741 890 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 HPGDSO60760 199 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 RPP14O95059 124 aaKnown RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 PLATP00750 562 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 SHC1P29353 583 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 GABRA4P48169 554 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 OR10A3P58181 314 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 IDNKQ5T6J7 187 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 AGAP6Q5VW22 663 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 ZNF322Q6U7Q0 402 aaPredicted RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 ZNF615Q8N8J6 731 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 SLC38A9Q8NBW4 561 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 OR5J2Q8NH18 312 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 SMPDL3BQ92485 455 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 LOXL4Q96JB6 756 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 AGAP4Q96P64 663 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 MKKSQ9NPJ1 570 aaPredicted RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 ING1Q9UK53 422 aaPredicted RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 EXOSC1Q9Y3B2 195 aaKnown RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 LY6G6EA0A0G2JKS1 128 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 FABP12A6NFH5 140 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 SCDO00767 359 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 SGCEO43556 437 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 SELENOFO60613 162 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 UTS2O95399 124 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 TIAF1O95411 115 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 ECDO95905 644 aaPredicted RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 FBLP22087 321 aaKnown RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 AHCYP23526 432 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 RPS5P46782 204 aaKnown RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 MTFR2Q6P444 385 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 C8orf44Q96CB5 159 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 SGTBQ96EQ0 304 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 TMEM68Q96MH6 324 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 ZNF416Q9BWM5 594 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 TRIM2Q9C040 744 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 ANKRD19PQ9H560 264 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 AKIRIN1Q9H9L7 192 aaPredicted RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 CPNE5Q9HCH3 593 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 CCDC59Q9P031 241 aaKnown RBP9.09□□□□□ -0.95
USP11-201ENST00000218348 GSTK1Q9Y2Q3 226 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 U3KQA8 63 aa9.09□□□□□ -0.95
USP11-201ENST00000218348 TVP23AA6NH52 213 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 DUX1O43812 170 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 APOC1P02654 83 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 CD63P08962 238 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 SLC2A2P11168 524 aaPredicted RBP9.08□□□□□ -0.96
USP11-201ENST00000218348 TMEM11P17152 192 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 APEX1P27695 318 aaKnown RBP9.08□□□□□ -0.96
USP11-201ENST00000218348 TCTE1Q5JU00 501 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 ZCCHC12Q6PEW1 402 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 ULK3Q6PHR2 472 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 C19orf48Q6RUI8 117 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 RTL4Q6ZR62 310 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 GLCCI1Q86VQ1 547 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 ENKURQ8TC29 256 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 SDHCQ99643 169 aaPredicted RBP9.08□□□□□ -0.96
USP11-201ENST00000218348 G6PC3Q9BUM1 346 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.08□□□□□ -0.962e-6■□□□□ 8.9
USP11-201ENST00000218348 MMP28Q9H239 520 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 PCDHB16Q9NRJ7 776 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 LANCL2Q9NS86 450 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 HPF1Q9NWY4 346 aa9.08□□□□□ -0.96
USP11-201ENST00000218348 EIF3KQ9UBQ5 218 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms