RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 LRRTM2O43300 516 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 DKK1O94907 266 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 ZNF806P0C7X5 589 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 PYCR1P32322 319 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 ETV6P41212 452 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 PTGDSP41222 190 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 CASP3P42574 277 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 RPL27P61353 136 aaKnown RBP15.73■□□□□ 0.11
VRK1-201ENST00000216639 INSM1Q01101 510 aaPredicted RBP15.73■□□□□ 0.11
VRK1-201ENST00000216639 HNRNPA0Q13151 305 aaKnown RBP15.73■□□□□ 0.11
VRK1-201ENST00000216639 CDONQ4KMG0 1287 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 LINC01590Q5TEZ4 76 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 SLC6A19Q695T7 634 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 VASNQ6EMK4 673 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 ARL9Q6T311 187 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 ARSKQ6UWY0 536 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 SLC16A9Q7RTY1 509 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 EXD3Q8N9H8 876 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 OR11G2Q8NGC1 345 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 MFSD8Q8NHS3 518 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 SMAP2Q8WU79 429 aaPredicted RBP15.73■□□□□ 0.11
VRK1-201ENST00000216639 ASB15Q8WXK1 588 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 LIN37Q96GY3 246 aaPredicted RBP15.73■□□□□ 0.11
VRK1-201ENST00000216639 SNX18Q96RF0 628 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 PTGES2Q9H7Z7 377 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 ZMIZ1Q9ULJ6 1067 aa15.73■□□□□ 0.11
VRK1-201ENST00000216639 A0A1W2PRG6 482 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 CD8B2A6NJW9 211 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 PLPP3O14495 311 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 ARHGEF9O43307 516 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 SELENOFO60613 162 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 WISP1O95388 367 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 RAB40ALP0C0E4 278 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 CD8BP10966 210 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 ICAM2P13598 275 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 FOXF1Q12946 379 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 SF3A2Q15428 464 aaKnown RBP15.72■□□□□ 0.11
VRK1-201ENST00000216639 SLC25A53Q5H9E4 307 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 Q6ZNX1 250 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 SSX6Q7RTT6 188 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 MS4A15Q8N5U1 240 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 SCAIQ8N9R8 606 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 ZNF417Q8TAU3 575 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 ZNRF4Q8WWF5 429 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 DNAJA3Q96EY1 480 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 ZNF587Q96SQ5 575 aaPredicted RBP15.72■□□□□ 0.11
VRK1-201ENST00000216639 POTEKPQ9BYX7 375 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 TXNIPQ9H3M7 391 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 SRA1Q9HD15 236 aaKnown RBP15.72■□□□□ 0.11
VRK1-201ENST00000216639 TMEM9BQ9NQ34 198 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 SIRT4Q9Y6E7 314 aaPredicted RBP15.72■□□□□ 0.11
VRK1-201ENST00000216639 MPDZO75970 2070 aa15.72■□□□□ 0.11
VRK1-201ENST00000216639 COL27A1Q8IZC6 1860 aaPredicted RBP15.72■□□□□ 0.11
VRK1-201ENST00000216639 LOC110117498-PIK3R3F6TDL0 507 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 CTDSP2O14595 271 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 GALR2O43603 387 aaPredicted RBP15.71■□□□□ 0.11
VRK1-201ENST00000216639 CBFA2T3O75081 653 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 SULT1C4O75897 302 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 IGHMP01871 453 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 TCN2P20062 427 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 ACVR1BP36896 505 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 SSR4P51571 173 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 HCCSP53701 268 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 ACKR1Q16570 336 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 PLPPR5Q32ZL2 321 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 CCDC58Q4VC31 144 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 TP53I3Q53FA7 332 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 TMEM81Q6P7N7 255 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 CCDC190Q86UF4 302 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 PARP16Q8N5Y8 322 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 OR4K17Q8NGC6 315 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 CHPT1Q8WUD6 406 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 NXPE2Q96DL1 559 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 MNTQ99583 582 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 SLC30A2Q9BRI3 323 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 EDEM2Q9BV94 578 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 ZNF160Q9HCG1 818 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 NCDNQ9UBB6 729 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 GNG8Q9UK08 70 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 TCFL5Q9UL49 500 aa15.71■□□□□ 0.11
VRK1-201ENST00000216639 CHCHD2Q9Y6H1 151 aaPredicted RBP15.71■□□□□ 0.11
VRK1-201ENST00000216639 FAM171A2A8MVW0 826 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 FTCDNL1E5RQL4 147 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 E9PI62 339 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 SERPINA3P01011 423 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 CELA2AP08217 269 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 CLEC2LP0C7M8 214 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 TFPIP10646 304 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 CENPAP49450 140 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 BLVRAP53004 296 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 SLC3A1Q07837 685 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 EIF3IQ13347 325 aaKnown RBP15.71■□□□□ 0.1
VRK1-201ENST00000216639 ZNF181Q2M3W8 571 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 TMEM164Q5U3C3 297 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 EEF1A1P5Q5VTE0 462 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 DMKNQ6E0U4 476 aaPredicted RBP15.71■□□□□ 0.1
VRK1-201ENST00000216639 IL20RBQ6UXL0 311 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 KCTD20Q7Z5Y7 419 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 EGFL6Q8IUX8 553 aa15.71■□□□□ 0.1
VRK1-201ENST00000216639 SYT14Q8NB59 555 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms