RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NPSR1Q6W5P4 371 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 NUDT18Q6ZVK8 323 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 FAM60AQ9NP50 221 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 POLE3Q9NRF9 147 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 NOSIPQ9Y314 301 aaKnown RBP12.65□□□□□ -0.38
PHGDH-233ENST00000642021 ALPK2Q86TB3 2170 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 PCP4L1A6NKN8 68 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 I3L521 148 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 AIPO00170 330 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 SLC35E2P0CK97 266 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 IL32P24001 234 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 NTSR1P30989 418 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 BLVRAP53004 296 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 GAS6Q14393 721 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 LINC01590Q5TEZ4 76 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 FTMTQ8N4E7 242 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 MOSPD2Q8NHP6 518 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 NMNAT2Q9BZQ4 307 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 NANSQ9NR45 359 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 HRASLS2Q9NWW9 162 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 DCAF16Q9NXF7 216 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 OR5V1Q9UGF6 321 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 ARPC1BO15143 372 aaKnown RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 RPP14O95059 124 aaKnown RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 HRGP04196 525 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 TYRP1P17643 537 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 CDKN2AP42771 156 aaKnown RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 PGDP52209 483 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 ERV3-1Q14264 604 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 BAIAP2L2Q6UXY1 529 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 KANSL1Q7Z3B3 1105 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 PLEKHA1Q9HB21 404 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 MKKSQ9NPJ1 570 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 NPDC1Q9NQX5 325 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 CA10Q9NS85 328 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 PPIEQ9UNP9 301 aaKnown RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF281Q9Y2X9 895 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 DOCK8Q8NF50 2099 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 A0A087WUJ7 227 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 CD1AP06126 327 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 DCTDP32321 178 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 RPL6Q02878 288 aaKnown RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 PLA2G7Q13093 441 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 GRK1Q15835 563 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 ALG11Q2TAA5 492 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF684Q5T5D7 378 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 PWWP2BQ6NUJ5 590 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 DPY19L2P2Q6ZN68 376 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 GLRX5Q86SX6 157 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 Q96M85 177 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 VSTM2LQ96N03 204 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 LMF2Q9BU23 707 aaKnown RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 TCEAL2Q9H3H9 227 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-233ENST00000642021 COQ3Q9NZJ6 369 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 PIPOXQ9P0Z9 390 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 KLHDC2Q9Y2U9 406 aa12.64□□□□□ -0.39
PHGDH-233ENST00000642021 HEATR5AQ86XA9 2040 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 NPIPB9F8W1W9 429 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF749O43361 778 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 TGM6O95932 706 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 TMIGD3P0DMS9 266 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-233ENST00000642021 ADRA2CP18825 462 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 SLC25A25Q6KCM7 469 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 COMMD7Q86VX2 200 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 DNAAF1Q8NEP3 725 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 SYNPRQ8TBG9 265 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 PHOSPHO2Q8TCD6 241 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 RPS4Y2Q8TD47 263 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 HERVK_113Q902F9 699 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 GAS2L1Q99501 681 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-233ENST00000642021 CLEC4MQ9H2X3 399 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-233ENST00000642021 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF275Q9NSD4 429 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-233ENST00000642021 FOXJ3Q9UPW0 622 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 PCDHGA5Q9Y5G8 931 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 V9GY05 133 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-233ENST00000642021 GPRIN2O60269 458 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 CELA2BP08218 269 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-233ENST00000642021 HOXC4P09017 264 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-233ENST00000642021 OR8G3PP0DMU2 310 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 HOXB2P14652 356 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 LCN1P31025 176 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 LGALS3BPQ08380 585 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 LINC00303Q3SY05 128 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 CLLU1Q5K131 121 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 FAM69AQ5T7M9 428 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 RNF44Q7L0R7 432 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 RSC1A1Q92681 617 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 CMTM3Q96MX0 182 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 GABRG3Q99928 467 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 LMAN2LQ9H0V9 348 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 NOX3Q9HBY0 568 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 KLHL9Q9P2J3 617 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 KCNN3Q9UGI6 736 aa12.63□□□□□ -0.39
PHGDH-233ENST00000642021 IGKV1D-42A0A075B6H8 117 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms