RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 PDLIM1O00151 329 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 KPNA4O00629 521 aaPredicted RBP23.56■■□□□ 1.36
VEGFA-231ENST00000640499 CNOT4O95628 575 aaKnown RBP23.56■■□□□ 1.36
VEGFA-231ENST00000640499 THRBP10828 461 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 COX5AP20674 150 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 FOXD4Q12950 439 aaPredicted RBP23.56■■□□□ 1.36
VEGFA-231ENST00000640499 IQCCQ4KMZ1 466 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 TSPO2Q5TGU0 170 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 CASP12Q6UXS9 341 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 FKBP9P1Q75LS8 142 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 WDFY1Q8IWB7 410 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 ADPRHL1Q8NDY3 354 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 PFN4Q8NHR9 129 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 S100PBPQ96BU1 408 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 C7orf34Q96L11 122 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 SLC19A3Q9BZV2 496 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 ACTR6Q9GZN1 396 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 SLC7A10Q9NS82 523 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 C20orf141Q9NUB4 165 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 MRPL39Q9NYK5 338 aaKnown RBP23.56■■□□□ 1.36
VEGFA-231ENST00000640499 RPS6KA6Q9UK32 745 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 CORINQ9Y5Q5 1042 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 ABCA4P78363 2273 aa23.56■■□□□ 1.36
VEGFA-231ENST00000640499 POLQO75417 2590 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 ARPC2O15144 300 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 UBOX5O94941 541 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 CH25HO95992 272 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 IFNW1P05000 195 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 HLA-DOBP13765 273 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 SELENOPP49908 381 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 LGALS3BPQ08380 585 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 ITGADQ13349 1161 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 MFSD13AQ14CX5 517 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 SPATS1Q496A3 300 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 AAED1Q7RTV5 226 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 SLC46A3Q7Z3Q1 461 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 SCAIQ8N9R8 606 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 ZC3HAV1LQ96H79 300 aaKnown RBP23.55■■□□□ 1.36
VEGFA-231ENST00000640499 LURAP1Q96LR2 239 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 MED18Q9BUE0 208 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 OR10A4Q9H209 315 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 PARPBPQ9NWS1 579 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 MALT1Q9UDY8 824 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 CSMD1Q96PZ7 3565 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 ALPK2Q86TB3 2170 aa23.55■■□□□ 1.36
VEGFA-231ENST00000640499 A0A1W2PPR1 153 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 DEFB108AA8MXU0 73 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 PLPP3O14495 311 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 TRAF3IP2O43734 574 aaPredicted RBP23.54■■□□□ 1.36
VEGFA-231ENST00000640499 LYZL6O75951 148 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 ZNF432O94892 652 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 MT-ATP6P00846 226 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 SEMG1P04279 462 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 GTF2E2P29084 291 aaKnown RBP23.54■■□□□ 1.36
VEGFA-231ENST00000640499 C10orf53Q8N6V4 93 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 ZNF433Q8N7K0 673 aaPredicted RBP23.54■■□□□ 1.36
VEGFA-231ENST00000640499 TMEM239Q8WW34 195 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 HDHD5Q9BXW7 423 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 MAGEL2Q9UJ55 1249 aa23.54■■□□□ 1.36
VEGFA-231ENST00000640499 MT-ND1P03886 318 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 HRGP04196 525 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 ITGA5P08648 1049 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 ASAH2BP0C7U1 165 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 CRYGSP22914 178 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 LOXP28300 417 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-231ENST00000640499 RBM34P42696 430 aaKnown RBP23.53■■□□□ 1.36
VEGFA-231ENST00000640499 ST3GAL3Q11203 375 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 FAPQ12884 760 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 PMS2P3Q13401 168 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 SEZ6L2Q6UXD5 910 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 LINGO2Q7L985 606 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 OFCC1Q8IZS5 231 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 ASPNQ9BXN1 380 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 TAS2R5Q9NYW4 299 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 NDUFAF4Q9P032 175 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 C6orf203Q9P0P8 240 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-231ENST00000640499 ENPP4Q9Y6X5 453 aa23.53■■□□□ 1.36
VEGFA-231ENST00000640499 ENO4A6NNW6 628 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 PIP5K1CO60331 668 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 CLDN17P56750 224 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 VLDLRP98155 873 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 BHLHA15Q7RTS1 189 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-231ENST00000640499 UBE2J2Q8N2K1 259 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 STEAP2Q8NFT2 490 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 OR5J2Q8NH18 312 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 KISS1RQ969F8 398 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-231ENST00000640499 TXNDC15Q96J42 360 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 C1orf21Q9H246 121 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 FKRPQ9H9S5 495 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 FANCFQ9NPI8 374 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 SAMD4AQ9UPU9 718 aaKnown RBP23.52■■□□□ 1.36
VEGFA-231ENST00000640499 V9GYQ6 96 aa23.52■■□□□ 1.36
VEGFA-231ENST00000640499 KLF4O43474 513 aa23.51■■□□□ 1.35
VEGFA-231ENST00000640499 PPP3CBP16298 524 aa23.51■■□□□ 1.35
VEGFA-231ENST00000640499 ZNF43P17038 809 aa23.51■■□□□ 1.35
VEGFA-231ENST00000640499 NRGNQ92686 78 aa23.51■■□□□ 1.35
VEGFA-231ENST00000640499 PYURFQ96I23 114 aa23.51■■□□□ 1.35
VEGFA-231ENST00000640499 SLCO5A1Q9H2Y9 848 aa23.51■■□□□ 1.35
VEGFA-231ENST00000640499 ASB6Q9NWX5 421 aa23.51■■□□□ 1.35
VEGFA-231ENST00000640499 ZNF229Q9UJW7 825 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms