RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 CENPPQ6IPU0 288 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 CCDC137Q6PK04 289 aaKnown RBP2.47□□□□□ -2.01
CCDC7-216ENST00000640058 Q6ZPB1 254 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-216ENST00000640058 CCDC80Q76M96 950 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 C6orf120Q7Z4R8 191 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 VSTM4Q8IW00 320 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 LRRC75A-AS1Q8N1F1 130 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 TCTEX1D2Q8WW35 142 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 GIMAP1Q8WWP7 306 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 ZNF606Q8WXB4 792 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 RAPGEF5Q92565 580 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 ARPC1AQ92747 370 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 PSKH2Q96QS6 385 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 PARD6BQ9BYG5 372 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 OR11A1Q9GZK7 315 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 TRAPPC4Q9Y296 219 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 MEMO1Q9Y316 297 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 PDS5BQ9NTI5 1447 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 TRAV26-1A0A087WT03 109 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 A0A0G2JLM5 398 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 CLRN2A0PK11 232 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 A6NIZ1 184 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 MTX2O75431 263 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 LGI1O95970 557 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 POU2F1P14859 743 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 NPR2P20594 1047 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 COX5AP20674 150 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 FGF9P31371 208 aaPredicted RBP2.46□□□□□ -2.02
CCDC7-216ENST00000640058 CCT3P49368 545 aaKnown RBP2.46□□□□□ -2.02
CCDC7-216ENST00000640058 RAP1BP61224 184 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 KLRB1Q12918 225 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 RIPK1Q13546 671 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 ARL6IP1Q15041 203 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 KPRPQ5T749 579 aaPredicted RBP2.46□□□□□ -2.02
CCDC7-216ENST00000640058 TPGS2Q68CL5 300 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 ZSCAN25Q6NSZ9 544 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 KCNIP4Q6PIL6 250 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 CASC1Q6TDU7 716 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 RGS9BPQ6ZS82 235 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF621Q6ZSS3 439 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 C12orf56Q8IXR9 622 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF679Q8IYX0 411 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 ZCCHC7Q8N3Z6 543 aaKnown RBP2.46□□□□□ -2.02
CCDC7-216ENST00000640058 TRPV1Q8NER1 839 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 OR51S1Q8NGJ8 323 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 TIMD4Q96H15 378 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF578Q96N58 590 aaPredicted RBP2.46□□□□□ -2.02
CCDC7-216ENST00000640058 MTMR9Q96QG7 549 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 POPDC2Q9HBU9 364 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 ZDHHC4Q9NPG8 344 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 LHX9Q9NQ69 397 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 INPP5EQ9NRR6 644 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 V9GY05 133 aa2.46□□□□□ -2.02
CCDC7-216ENST00000640058 E9PBE3 544 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 RAMP3O60896 148 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 SCGNO76038 276 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 DBTP11182 482 aaKnown RBP2.45□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF14P17017 642 aaPredicted RBP2.45□□□□□ -2.02
CCDC7-216ENST00000640058 PCMT1P22061 227 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 QARSP47897 775 aaKnown RBP2.45□□□□□ -2.02
CCDC7-216ENST00000640058 TNFRSF17Q02223 184 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 TRIM16LQ309B1 348 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 C11orf71Q6IPW1 123 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 SLC25A34Q6PIV7 304 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF836Q6ZNA1 936 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 GDPD3Q7L5L3 318 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 C6orf223Q8N319 242 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 MFSD9Q8NBP5 474 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 NPBQ8NG41 125 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 OR5D13Q8NGL4 314 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 BRSK1Q8TDC3 778 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 HTR3CQ8WXA8 447 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 EFHD2Q96C19 240 aaPredicted RBP2.45□□□□□ -2.02
CCDC7-216ENST00000640058 SECISBP2Q96T21 854 aaKnown RBP2.45□□□□□ -2.02
CCDC7-216ENST00000640058 TMEM43Q9BTV4 400 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 CAPS2Q9BXY5 557 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 DMAP1Q9NPF5 467 aaPredicted RBP2.45□□□□□ -2.02
CCDC7-216ENST00000640058 SLC25A37Q9NYZ2 338 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 ATP10AO60312 1499 aa2.45□□□□□ -2.02
CCDC7-216ENST00000640058 PPIAL4EA0A075B759 164 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 IGHV1OR21-1A0A087WYE8 117 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 A0A0U1RQS6 177 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 IDSB3KWA1 339 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 PFKFB2O60825 505 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 AP2A1O95782 977 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 PPIAL4FP0DN26 164 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 POLR2EP19388 210 aaKnown RBP2.44□□□□□ -2.02
CCDC7-216ENST00000640058 NMUP48645 174 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 DUSP3P51452 185 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-216ENST00000640058 ZNF763Q0D2J5 394 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 VGLL4Q14135 290 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 DPYSL2Q16555 572 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 NSUN5P1Q3KNT7 163 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 ABCA11PQ4W5N1 156 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 CTRB2Q6GPI1 263 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 OR4F3Q6IEY1 312 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 PRSS41Q7RTY9 318 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 SLC35F2Q8IXU6 374 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 OR9G1Q8NH87 305 aa2.44□□□□□ -2.02
CCDC7-216ENST00000640058 NPAS2Q99743 824 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms