RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ELOVL6Q9H5J4 265 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 CCNB1IP1Q9NPC3 277 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 SAMSN1Q9NSI8 373 aaKnown RBP4.93□□□□□ -1.62
RFC1-217ENST00000639695 RSPH14Q9UHP6 348 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 FLVCR1Q9Y5Y0 555 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 PRSS21Q9Y6M0 314 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 GON4LQ3T8J9 2241 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 FANCIQ9NVI1 1328 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 SNED1Q8TER0 1413 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 A0A1W2PPR1 153 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 WWP2O00308 870 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 GOSR2O14653 212 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 SPOPO43791 374 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 S100A9P06702 114 aaKnown RBP4.92□□□□□ -1.62
RFC1-217ENST00000639695 TPM1P09493 284 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 OR8U8P0C7N1 319 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 IGLL1P15814 213 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 PRKACAP17612 351 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 TBPP20226 339 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 NPR2P20594 1047 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 MSR1P21757 451 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 FOXN2P32314 431 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 RPS5P46782 204 aaKnown RBP4.92□□□□□ -1.62
RFC1-217ENST00000639695 CX3CR1P49238 355 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 ERVK-25P63136 954 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 PAX5Q02548 391 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 LIPEQ05469 1076 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 BCL2L1Q07817 233 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 PAN3Q58A45 887 aaKnown RBP4.92□□□□□ -1.62
RFC1-217ENST00000639695 OR2B11Q5JQS5 317 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 Q6ZN92 141 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 ZNF571Q7Z3V5 609 aaPredicted RBP4.92□□□□□ -1.62
RFC1-217ENST00000639695 PPP1R27Q86WC6 154 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 C17orf82Q86X59 251 aaPredicted RBP4.92□□□□□ -1.62
RFC1-217ENST00000639695 MMAAQ8IVH4 418 aaKnown RBP4.92□□□□□ -1.62
RFC1-217ENST00000639695 NAXDQ8IW45 347 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 SKA3Q8IX90 412 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 PQLC3Q8N755 202 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 OR13F1Q8NGS4 319 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 OR9A1PQ8NGU1 263 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 AGAP11Q8TF27 550 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 NRGNQ92686 78 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 C8orf44Q96CB5 159 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 SORT1Q99523 831 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 HIST1H4GQ99525 98 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 SH3GL1Q99961 368 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 KLHDC3Q9BQ90 382 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 SOSTQ9BQB4 213 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 TEKT3Q9BXF9 490 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 TMEM59Q9BXS4 323 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 ANKRD60Q9BZ19 345 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 RACGAP1Q9H0H5 632 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 GBA3Q9H227 469 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 MRPS30Q9NP92 439 aaKnown RBP4.92□□□□□ -1.62
RFC1-217ENST00000639695 GIN1Q9NXP7 522 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 B4GALT7Q9UBV7 327 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 UBQLN1Q9UMX0 589 aaKnown RBP4.92□□□□□ -1.62
RFC1-217ENST00000639695 V9GY05 133 aa4.92□□□□□ -1.62
RFC1-217ENST00000639695 TDRD15B5MCY1 1934 aaKnown RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 SIRPB1O00241 398 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 CDX4O14627 284 aaPredicted RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 TRDMT1O14717 391 aaKnown RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 CHMP2AO43633 222 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 FGFR1OPO95684 399 aaKnown RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 TBX6O95947 436 aaPredicted RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 PLEKP08567 350 aaPredicted RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 STOMP27105 288 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 SLC11A1P49279 550 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 CCNHP51946 323 aaPredicted RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 KRTAP10-12P60413 245 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 PRR4Q16378 134 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 KLF17Q5JT82 389 aaPredicted RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 GPRC6AQ5T6X5 926 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 ZNF658Q5TYW1 1059 aaPredicted RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 TIGD3Q6B0B8 471 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 C11orf71Q6IPW1 123 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 REEP3Q6NUK4 255 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 STXBP4Q6ZWJ1 553 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 LIX1Q8N485 282 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 CCDC71LQ8N9Z2 235 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 GPX8Q8TED1 209 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 ANKRD49Q8WVL7 239 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 ZNF689Q96CS4 500 aaPredicted RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 CMTM7Q96FZ5 175 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 ZNF599Q96NL3 588 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 MS4A4EQ96PG1 132 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 OR8B4Q96RC9 309 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 RNF126Q9BV68 326 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 FAIM2Q9BWQ8 316 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 RGCCQ9H4X1 137 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 GPATCH2LQ9NWQ4 482 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 TREM2Q9NZC2 230 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 KCNIP1Q9NZI2 227 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 UXTQ9UBK9 157 aaPredicted RBP4.91□□□□□ -1.62
RFC1-217ENST00000639695 KLHL21Q9UJP4 597 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 TRAF3IP3Q9Y228 551 aa4.91□□□□□ -1.62
RFC1-217ENST00000639695 IGHV1OR21-1A0A087WYE8 117 aa4.9□□□□□ -1.63
RFC1-217ENST00000639695 IGHV7-81A0A0B4J1V7 117 aa4.9□□□□□ -1.63
RFC1-217ENST00000639695 IGHV3-35A0A0C4DH35 117 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms