RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 VANGL1Q8TAA9 524 aaPredicted RBP15.52■□□□□ 0.08
PNKP-230ENST00000638016 TAMM41Q96BW9 452 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 ARHGDIGQ99819 225 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 SIKE1Q9BRV8 207 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 TRAF4Q9BUZ4 470 aaPredicted RBP15.52■□□□□ 0.08
PNKP-230ENST00000638016 GDF2Q9UK05 429 aaPredicted RBP15.52■□□□□ 0.08
PNKP-230ENST00000638016 RASD1Q9Y272 281 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 A0A087WUJ7 227 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 PRORSD1PA6NEY8 169 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 FZD7O75084 574 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 SERPINB7O75635 380 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 LY6G6DO95868 133 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 THY1P04216 161 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 HLA-DOBP13765 273 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 CD247P20963 164 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 GTF2E2P29084 291 aaKnown RBP15.51■□□□□ 0.07
PNKP-230ENST00000638016 FAM69AQ5T7M9 428 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 REP15Q6BDI9 236 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 OR7E24Q6IFN5 339 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 ULK3Q6PHR2 472 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 TMEM108Q6UXF1 575 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 WDR88Q6ZMY6 472 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 POMGNT2Q8NAT1 580 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 C1orf162Q8NEQ5 155 aaPredicted RBP15.51■□□□□ 0.07
PNKP-230ENST00000638016 OR6T1Q8NGN1 323 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 DNAJA4Q8WW22 397 aaPredicted RBP15.51■□□□□ 0.07
PNKP-230ENST00000638016 SLC38A4Q969I6 547 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 MOGAT1Q96PD6 335 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 MCHR1Q99705 422 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 NELFAQ9H3P2 528 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 C12orf10Q9HB07 376 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 SLC13A4Q9UKG4 626 aa15.51■□□□□ 0.07
PNKP-230ENST00000638016 NSD1Q96L73 2696 aaPredicted RBP15.51■□□□□ 0.07
PNKP-230ENST00000638016 ANK3Q12955 4377 aaKnown RBP15.51■□□□□ 0.07
PNKP-230ENST00000638016 TRAV36DV7A0A075B6V5 113 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 A0A096LPE4 126 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 A0A1W2PPZ6 126 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 CPSF4LA6NMK7 179 aaKnown RBP15.5■□□□□ 0.07
PNKP-230ENST00000638016 KRT33AO76009 404 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 ZNF432O94892 652 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 VAMP5O95183 116 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 IGHV4-39P01824 125 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 BGLAPP02818 100 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 VIMP08670 466 aaKnown RBP15.5■□□□□ 0.07
PNKP-230ENST00000638016 PCGF2P35227 344 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 ARFIP2P53365 341 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 KLF10Q13118 480 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 NRF1Q16656 503 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 TRMT5Q32P41 509 aaKnown RBP15.5■□□□□ 0.07
PNKP-230ENST00000638016 TBRG1Q3YBR2 411 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 PHYHD1Q5SRE7 291 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 METTL21CQ5VZV1 264 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 NANOGP8Q6NSW7 305 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 MAPK1IP1LQ8NDC0 245 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 OR1K1Q8NGR3 316 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 TSPEARQ8WU66 669 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 HTRA1Q92743 480 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 GTPBP3Q969Y2 492 aaKnown RBP15.5■□□□□ 0.07
PNKP-230ENST00000638016 ZNF837Q96EG3 531 aaPredicted RBP15.5■□□□□ 0.07
PNKP-230ENST00000638016 SLC47A1Q96FL8 570 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 OXGR1Q96P68 337 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 NANOGQ9H9S0 305 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 SEC61A2Q9H9S3 476 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 TMEM27Q9HBJ8 222 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 SAR1AQ9NR31 198 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 POU2F3Q9UKI9 436 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 PRDM4Q9UKN5 801 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 NIPBLQ6KC79 2804 aaeCLIP15.5■□□□□ 0.07
PNKP-230ENST00000638016 CR1P17927 2039 aa15.5■□□□□ 0.07
PNKP-230ENST00000638016 ZNF587BE7ETH6 402 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 ATP6V1G2-DDX39BF2Z307 99 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 AIM2O14862 343 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 TRAF3IP2O43734 574 aaPredicted RBP15.49■□□□□ 0.07
PNKP-230ENST00000638016 SEC14L2O76054 403 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 LYPD3O95274 346 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 TROVE2P10155 538 aaKnown RBP eCLIP15.49■□□□□ 0.07
PNKP-230ENST00000638016 ZNF43P17038 809 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 TNFRSF1BP20333 461 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 PTAFRP25105 342 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 IL1RL1Q01638 556 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 ROR2Q01974 943 aaKnown RBP15.49■□□□□ 0.07
PNKP-230ENST00000638016 RBBP4Q09028 425 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 TNK1Q13470 666 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 FAM91A1Q658Y4 838 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 KLHL17Q6TDP4 642 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 DTX2Q86UW9 622 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 SNX32Q86XE0 403 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 C17orf78Q8N4C9 275 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 ARMCX1Q9P291 453 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 GMPR2Q9P2T1 348 aaKnown RBP15.49■□□□□ 0.07
PNKP-230ENST00000638016 AMDHD2Q9Y303 409 aa15.49■□□□□ 0.07
PNKP-230ENST00000638016 ABCA2Q9BZC7 2435 aa15.48■□□□□ 0.07
PNKP-230ENST00000638016 LOC100653049A0A140TA62 436 aa15.48■□□□□ 0.07
PNKP-230ENST00000638016 MS4A18H0YCH9 400 aa15.48■□□□□ 0.07
PNKP-230ENST00000638016 MRASO14807 208 aa15.48■□□□□ 0.07
PNKP-230ENST00000638016 KRT34O76011 436 aa15.48■□□□□ 0.07
PNKP-230ENST00000638016 ACVR1BP36896 505 aa15.48■□□□□ 0.07
PNKP-230ENST00000638016 PRPS1P60891 318 aa15.48■□□□□ 0.07
PNKP-230ENST00000638016 TGFBR3Q03167 851 aa15.48■□□□□ 0.07
PNKP-230ENST00000638016 C1DQ13901 141 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms