RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 HTR2AP28223 471 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 TTKP33981 857 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 SH3BGRP55822 239 aaPredicted RBP16.61■□□□□ 0.25
CLN6-221ENST00000637494 CLDN17P56750 224 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 CHRNB3Q05901 458 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 ZNF544Q6NX49 715 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 H1FNTQ75WM6 255 aaPredicted RBP16.61■□□□□ 0.25
CLN6-221ENST00000637494 LSRQ86X29 649 aaPredicted RBP16.61■□□□□ 0.25
CLN6-221ENST00000637494 EPHX4Q8IUS5 362 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 C10orf111Q8N326 155 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 MUC15Q8N387 334 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 SLC26A7Q8TE54 656 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 ANKRD27Q96NW4 1050 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 ZNF317Q96PQ6 595 aaPredicted RBP16.61■□□□□ 0.25
CLN6-221ENST00000637494 ASPNQ9BXN1 380 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 LINC00470Q9BZP3 86 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 IKZF5Q9H5V7 419 aa16.61■□□□□ 0.25
CLN6-221ENST00000637494 E7EQL1 145 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 LGI1O95970 557 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 CD8AP01732 235 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 TROVE2P10155 538 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLN6-221ENST00000637494 NQO1P15559 274 aaKnown RBP16.6■□□□□ 0.25
CLN6-221ENST00000637494 GRPRP30550 384 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 ACVR1BP36896 505 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 SPOCK1Q08629 439 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 OR1Q1Q15612 314 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 GLIPR1L2Q4G1C9 344 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 HIKESHIQ53FT3 197 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 KDM8Q8N371 416 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 GPR137CQ8N3F9 429 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 OR1K1Q8NGR3 316 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 OR6S1Q8NH40 331 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 TAAR8Q969N4 342 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 BOD1Q96IK1 185 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 ALKBH3Q96Q83 286 aaPredicted RBP16.6■□□□□ 0.25
CLN6-221ENST00000637494 CACNG6Q9BXT2 260 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 CORINQ9Y5Q5 1042 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 NF1P21359 2839 aa16.6■□□□□ 0.25
CLN6-221ENST00000637494 ZNF469Q96JG9 3925 aaPredicted RBP16.59■□□□□ 0.25
CLN6-221ENST00000637494 M0R082 166 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 MFN2O95140 757 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 IGHV4-39P01824 125 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 TP53P04637 393 aaPredicted RBP16.59■□□□□ 0.25
CLN6-221ENST00000637494 HOXB1P14653 301 aaPredicted RBP16.59■□□□□ 0.25
CLN6-221ENST00000637494 NUDT6P53370 316 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 MTPNP58546 118 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 ROR2Q01974 943 aaKnown RBP16.59■□□□□ 0.25
CLN6-221ENST00000637494 RAB35Q15286 201 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 ADRM1Q16186 407 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 TBRG1Q3YBR2 411 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 SWT1Q5T5J6 900 aaKnown RBP16.59■□□□□ 0.25
CLN6-221ENST00000637494 INTS11Q5TA45 600 aaKnown RBP16.59■□□□□ 0.25
CLN6-221ENST00000637494 ANKRD16Q6P6B7 361 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 PATL1Q86TB9 770 aaKnown RBP16.59■□□□□ 0.25
CLN6-221ENST00000637494 C10orf53Q8N6V4 93 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 SMYD1Q8NB12 490 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 ADPRHL1Q8NDY3 354 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 PIK3C3Q8NEB9 887 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 ANKK1Q8NFD2 765 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 ZNF417Q8TAU3 575 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 ZNF587Q96SQ5 575 aaPredicted RBP16.59■□□□□ 0.25
CLN6-221ENST00000637494 RHNO1Q9BSD3 238 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 PMF1-BGLAPU3KQ54 211 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 PRR14LQ5THK1 2151 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 ROS1P08922 2347 aa16.59■□□□□ 0.25
CLN6-221ENST00000637494 A0A087WUJ7 227 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 A0A0B4J2E0 115 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 A0A1B0GX12 115 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 RNF223E7ERA6 249 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 UPK3AO75631 287 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 C8BP07358 591 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 PTNP21246 168 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 CBLP22681 906 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 APOBEC3AP31941 199 aaPredicted RBP16.58■□□□□ 0.24
CLN6-221ENST00000637494 SLC25A3Q00325 362 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 CYLC2Q14093 348 aaPredicted RBP16.58■□□□□ 0.24
CLN6-221ENST00000637494 UEVLDQ8IX04 471 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 MAGEE2Q8TD90 523 aaPredicted RBP16.58■□□□□ 0.24
CLN6-221ENST00000637494 RASSF5Q8WWW0 418 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 MCHR1Q99705 422 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 SH3GL1Q99961 368 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 PRR14Q9BWN1 585 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 REG4Q9BYZ8 158 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 ZNF385DQ9H6B1 395 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 KLHL14Q9P2G3 628 aa16.58■□□□□ 0.24
CLN6-221ENST00000637494 LOC102725191A0A1B0GVB3 256 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 M0QX08 132 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 SSX4O60224 188 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 FMO6PO60774 539 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 CRYAAP02489 173 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 PCSK6P29122 969 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 DSCR9P59020 149 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 DMTNQ08495 405 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 PMS2P3Q13401 168 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 MMEL1Q495T6 779 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 ZNF613Q6PF04 617 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 COMTD1Q86VU5 262 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 PTOV1Q86YD1 416 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 SCAIQ8N9R8 606 aa16.57■□□□□ 0.24
CLN6-221ENST00000637494 SLC38A2Q96QD8 506 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms