RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 KATNB1Q9BVA0 655 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 ZNF703Q9H7S9 590 aaPredicted RBP13.83□□□□□ -0.2
CLN6-219ENST00000637329 FANCFQ9NPI8 374 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 MRPS18AQ9NVS2 196 aaKnown RBP13.83□□□□□ -0.2
CLN6-219ENST00000637329 NDUFA13Q9P0J0 144 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 GPR52Q9Y2T5 361 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 RAXQ9Y2V3 346 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 NAV2Q8IVL1 2488 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 SMIM31A0A1B0GVY4 71 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 A0A1W2PNV4 684 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 OR2M5A3KFT3 312 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 SLC22A31A6NKX4 558 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 SHISA8B8ZZ34 492 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 PRR23D1E9PI22 279 aaPredicted RBP13.82□□□□□ -0.2
CLN6-219ENST00000637329 H3BML4 177 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 M0R082 166 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 KLK10O43240 276 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 TLX3O43711 291 aaPredicted RBP13.82□□□□□ -0.2
CLN6-219ENST00000637329 EFNA2O43921 213 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 ZIC3O60481 467 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 PMS2P2O95744 297 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 MT-ND2P03891 347 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 SP1P08047 785 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 PRR23D2P0DMB1 279 aaPredicted RBP13.82□□□□□ -0.2
CLN6-219ENST00000637329 TFPIP10646 304 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 HTR1FP30939 366 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 MLLT10P55197 1068 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 CDH11P55287 796 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 ARG2P78540 354 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 RAB40BQ12829 278 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 MYBPHQ13203 477 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 PMS2P3Q13401 168 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 ZNF239Q16600 458 aaKnown RBP13.82□□□□□ -0.2
CLN6-219ENST00000637329 KLHL22Q53GT1 634 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 C1QL3Q5VWW1 255 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 SLC25A25Q6KCM7 469 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 NIPAL3Q6P499 406 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 KCTD8Q6ZWB6 473 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 ADCK1Q86TW2 530 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 TMEM178AQ8NBL3 297 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 ZNF417Q8TAU3 575 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 FCGR1BQ92637 280 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 MIB2Q96AX9 1013 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 SLC25A36Q96CQ1 311 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 SCMH1Q96GD3 660 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 ARL5BQ96KC2 179 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 SNX18Q96RF0 628 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 ZNF587Q96SQ5 575 aaPredicted RBP13.82□□□□□ -0.2
CLN6-219ENST00000637329 FAM192AQ9GZU8 254 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 CHST11Q9NPF2 352 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 HINT3Q9NQE9 182 aaKnown RBP13.82□□□□□ -0.2
CLN6-219ENST00000637329 INIPQ9NRY2 104 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 QPCTLQ9NXS2 382 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 TRAPPC4Q9Y296 219 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 B3GALT5Q9Y2C3 310 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 KCNMB2Q9Y691 235 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 DOCK10Q96BY6 2186 aa13.82□□□□□ -0.2
CLN6-219ENST00000637329 DPPA5A6NC42 116 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 A6NL46 340 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 KLRC4-KLRK1H3BQV0 150 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 PLPP3O14495 311 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 EFSO43281 561 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 DNPH1O43598 174 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 OR6A2O95222 327 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 SLC2A10O95528 541 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 ADORA3P0DMS8 318 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 IMPDH2P12268 514 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 IL11P20809 199 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 GDF1P27539 372 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 MTNR1AP48039 350 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 CTXN1P60606 82 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 GPR85P60893 370 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 RAC1P63000 192 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 PUDPQ08623 228 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 CRMP1Q14194 572 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 OR7A5Q15622 319 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 HYAL4Q2M3T9 481 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 DEFB109BQ30KR1 87 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 NADK2Q4G0N4 442 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 GXYLT1Q4G148 440 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 SLC35F1Q5T1Q4 408 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 RNLSQ5VYX0 342 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 FAM205BPQ63HN1 556 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 H1FNTQ75WM6 255 aaPredicted RBP13.81□□□□□ -0.2
CLN6-219ENST00000637329 LSRQ86X29 649 aaPredicted RBP13.81□□□□□ -0.2
CLN6-219ENST00000637329 STX19Q8N4C7 294 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 LSM14AQ8ND56 463 aaKnown RBP13.81□□□□□ -0.2
CLN6-219ENST00000637329 FAM83FQ8NEG4 500 aaPredicted RBP13.81□□□□□ -0.2
CLN6-219ENST00000637329 OR14L1PQ8NHC6 308 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 SGCDQ92629 289 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 RHNO1Q9BSD3 238 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 CDCA4Q9BXL8 241 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 CCDC90BQ9GZT6 254 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 TAS2R5Q9NYW4 299 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 H2AFY2Q9P0M6 372 aaPredicted RBP13.81□□□□□ -0.2
CLN6-219ENST00000637329 ERVK-18Q9QC07 812 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 WARS2Q9UGM6 360 aaKnown RBP13.81□□□□□ -0.2
CLN6-219ENST00000637329 ADAM18Q9Y3Q7 739 aa13.81□□□□□ -0.2
CLN6-219ENST00000637329 IER3IP1Q9Y5U9 82 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms