RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 A0A1B0GX78 115 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 FABP12A6NFH5 140 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ZNF670-ZNF695F2Z2N8 137 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 GDF9O60383 454 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 PPM1BO75688 479 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 HBQ1P09105 142 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ARSBP15848 533 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 DRD5P21918 477 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 RAB25P57735 213 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 DSG2Q14126 1118 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 TMEM81Q6P7N7 255 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 LANCL3Q6ZV70 420 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 MED25Q71SY5 747 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ZNF248Q8NDW4 579 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 WDR36Q8NI36 951 aaKnown RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 ZNF578Q96N58 590 aaPredicted RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 ACTR6Q9GZN1 396 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 NXF5Q9H1B4 397 aaKnown RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 PCDHB16Q9NRJ7 776 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 MYL12BO14950 172 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 AKAP8O43823 692 aaKnown RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 GMFGO60234 142 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SMPD2O60906 423 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 CSO75390 466 aaKnown RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 SCG5P05408 212 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 MYL12AP19105 171 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 MAKP20794 623 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 MEOX2P50222 304 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SMSP52788 366 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 CLDN20P56880 219 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SLC37A1P57057 533 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SNRPGP62308 76 aaKnown RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 ALKBH1Q13686 389 aaKnown RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 TRIM61Q5EBN2 209 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SLC27A4Q6P1M0 643 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 HSDL2Q6YN16 418 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 COMMD7Q86VX2 200 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ZSCAN1Q8NBB4 408 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 DUSP18Q8NEJ0 188 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SLC2A12Q8TD20 617 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 DNAJA4Q8WW22 397 aaPredicted RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 TMEM239Q8WW34 195 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 NR4A3Q92570 626 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 YIPF5Q969M3 257 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SAMD8Q96LT4 415 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ZNF416Q9BWM5 594 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SLC6A15Q9H2J7 730 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 DNAJB12Q9NXW2 375 aaKnown RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 SEMA5BQ9P283 1151 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 GTF2A1LQ9UNN4 478 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 HRH3Q9Y5N1 445 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ALPK2Q86TB3 2170 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 TRBV23-1A0A0A0MS06 115 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 MPC2O95563 127 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ACAA2P42765 397 aaKnown RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 MAP2K3P46734 347 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 CAV3P56539 151 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 RASSF6Q6ZTQ3 369 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 TMEM105Q8N8V8 129 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 OR52H1Q8NGJ2 320 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SLC25A46Q96AG3 418 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 MVB12AQ96EY5 273 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ZNF845Q96IR2 970 aaPredicted RBP10.53□□□□□ -0.72
CLN6-217ENST00000636964 OR1F2PQ96R84 312 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 VN1R1Q9GZP7 353 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ENKD1Q9H0I2 346 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 ANKRD19PQ9H560 264 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 TMEM27Q9HBJ8 222 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SLC25A19Q9HC21 320 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 SLCO1C1Q9NYB5 712 aa10.53□□□□□ -0.72
CLN6-217ENST00000636964 IGHV5-10-1A0A0J9YXX1 117 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 A0A1B0GWA3 101 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 LOC390937A0A1W2PQ73 354 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 RFPL3O75679 317 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 CDRT1O95170 752 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 HTR3BO95264 441 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 LYPD3O95274 346 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 SLC2A10O95528 541 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 HLA-DQB1P01920 261 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 IFI6P09912 130 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 GCGRP47871 477 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 MAP2K6P52564 334 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 ATP12AP54707 1039 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 HNRNPA0Q13151 305 aaKnown RBP10.52□□□□□ -0.73
CLN6-217ENST00000636964 BTN1A1Q13410 526 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 PYDC2Q56P42 97 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 PLET1Q6UQ28 207 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 GPAT4Q86UL3 456 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 NKAIN3Q8N8D7 197 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 OR4Q3Q8NH05 313 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 OTULINQ96BN8 352 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 ZC3HAV1LQ96H79 300 aaKnown RBP10.52□□□□□ -0.73
CLN6-217ENST00000636964 DIRAS2Q96HU8 199 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 G6PC3Q9BUM1 346 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 NUDT9Q9BW91 350 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 CDCP1Q9H5V8 836 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 APMAPQ9HDC9 416 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 SLC22A11Q9NSA0 550 aa10.52□□□□□ -0.73
CLN6-217ENST00000636964 YARS2Q9Y2Z4 477 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms