RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ACTC1P68032 377 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 ACTA1P68133 377 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 SNTA1Q13424 505 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 CAMK2DQ13557 499 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 OR8S1Q8NH09 359 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 THEM6Q8WUY1 208 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 ADAD1Q96M93 576 aaKnown RBP12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 ALG12Q9BV10 488 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 HRASLSQ9HDD0 168 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 SLC6A5Q9Y345 797 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 C7orf66A4D0T2 115 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 RLN1P04808 185 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 HPGDP15428 266 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 MMP15P51511 669 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 TMEM69Q5SWH9 247 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 SLC35D2Q76EJ3 337 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 NLRC3Q7RTR2 1065 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 RLN3Q8WXF3 142 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 SLC25A38Q96DW6 304 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 CLEC4MQ9H2X3 399 aaPredicted RBP12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 MGAT4CQ9UBM8 478 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 ENTPD2Q9Y5L3 495 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 NPFFR2Q9Y5X5 522 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 UNC13CQ8NB66 2214 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 C2orf74A8MZ97 194 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 OR2T7P0C7T2 308 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 CDK2P24941 298 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 TPMTP51580 245 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 CCR9P51686 369 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 ARFIP1P53367 373 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 KLF9Q13886 244 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 ESCO2Q56NI9 601 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 PRAMEF17Q5VTA0 474 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 ULK3Q6PHR2 472 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 DPY19L4Q7Z388 723 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 OR6N2Q8NGY6 317 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 OR2T27Q8NH04 317 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 C16orf52Q8NHV5 167 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 ADAMTS14Q8WXS8 1223 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 ATOH1Q92858 354 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 JAM3Q9BX67 310 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 TRIM2Q9C040 744 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 RANBP3Q9H6Z4 567 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 HEXA-AS1Q9H8Q6 139 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 WDR76Q9H967 626 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 IFITM5A6NNB3 132 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 WISP1O95388 367 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 HLA-DQA2P01906 255 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 POU3F2P20265 443 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 AP2S1P53680 142 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 MAZP56270 477 aaKnown RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 CTXN1P60606 82 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 CD226Q15762 336 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 GRK1Q15835 563 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 LINC00303Q3SY05 128 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 C1QL3Q5VWW1 255 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 LIPNQ5VXI9 398 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 RPL13AP3Q6NVV1 102 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 FAM199XQ6PEV8 388 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 FAM198BQ6UWH4 519 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 FAM160A2Q8N612 972 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 DVL3Q92997 716 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 MMABQ96EY8 250 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 STACQ99469 402 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 INPP5EQ9NRR6 644 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 MRPL39Q9NYK5 338 aaKnown RBP12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 GLTPQ9NZD2 209 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 SATB2Q9UPW6 733 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 CAMK2AQ9UQM7 478 aa12.82□□□□□ -0.36
CACNA1A-228ENST00000636610 TCRBV21S2A2A0A5A6 115 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 ELOA3DA6NLF2 546 aaPredicted RBP12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 NKX2-2O95096 273 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 NUDT14O95848 222 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 SERPINA3P01011 423 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 S1PR1P21453 382 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 DIO1P49895 249 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 PITPNAQ00169 270 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 GUCA2AQ02747 115 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 ELOA3BQ3SY89 546 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 COMMD7Q86VX2 200 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 OOSP2Q86WS3 158 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 SLC22A18ASQ8N1D0 253 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 ELOA3Q8NG57 546 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 SMIM4Q8WVI0 70 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 SLC25A36Q96CQ1 311 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 OR2M2Q96R28 347 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 GAL3ST4Q96RP7 486 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 TCF7L1Q9HCS4 588 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 PCDHGA9Q9Y5G4 932 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 ZNF879B4DU55 563 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 CTSEP14091 401 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 HNRNPA2B1P22626 353 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 HHEXQ03014 270 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 SFRP5Q5T4F7 317 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 SIGIRRQ6IA17 410 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 ARMC6Q6NXE6 501 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 RPL22L1Q6P5R6 122 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 BTN2A1Q7KYR7 527 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 JAZF1Q86VZ6 243 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms