RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SAGE1Q9NXZ1 904 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OSGIN2Q9Y236 505 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SH2D1BO14796 132 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 FOXD2O60548 495 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 B3GALNT1O75752 331 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ELAVL4P26378 380 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TAS2R45P59539 299 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 LTBQ06643 244 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TNK1Q13470 666 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 HSF5Q4G112 596 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 MFSD12Q6NUT3 480 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SLC35F3Q8IY50 421 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 EXD3Q8N9H8 876 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PLPP5Q8NEB5 264 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 GJC3Q8NFK1 279 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 B3GNT7Q8NFL0 401 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OR2T6Q8NHC8 308 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 HSD17B8Q92506 261 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ISG20Q96AZ6 181 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TIMM29Q9BSF4 260 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SELENOIQ9C0D9 397 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 LIN7CQ9NUP9 197 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CACFD1Q9UGQ2 172 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 INTS6Q9UL03 887 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ENPP4Q9Y6X5 453 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 NPIPB15A6NHN6 443 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CYTIPO60759 359 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 FBXO45P0C2W1 286 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF266Q14584 549 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OPCMLQ14982 345 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 MLF2Q15773 248 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TECRLQ5HYJ1 363 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PIP5KL1Q5T9C9 394 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 RPS27LQ71UM5 84 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OR4K5Q8NGD3 323 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM230Q96A57 120 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 MOCOSQ96EN8 888 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 KCNJ15Q99712 375 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 HRH4Q9H3N8 390 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 WASH6PQ9NQA3 447 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 LANCL2Q9NS86 450 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 NECAP2Q9NVZ3 263 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PROCRQ9UNN8 238 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 COQ4Q9Y3A0 265 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 METTL15A6NJ78 407 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OR6C65A6NJZ3 312 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 H3BNC9 293 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 M0R1B8 84 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ST8SIA5O15466 376 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 FZD7O75084 574 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OR2J3O76001 311 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 RPS17P08708 135 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CNR2P34972 360 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 BPIFB3P59826 476 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 MAP4K2Q12851 820 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PPP1R3AQ16821 1122 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF425Q6IV72 752 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CPOQ8IVL8 374 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SLC35B2Q8TB61 432 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TLCD1Q96CP7 247 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ELP4Q96EB1 424 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 MUS81Q96NY9 551 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 DPH2Q9BQC3 489 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 DCAF16Q9NXF7 216 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SLCO3A1Q9UIG8 710 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PIGLQ9Y2B2 252 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 YTHDF2Q9Y5A9 579 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 MEIS3P2A8K0S8 358 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 DNASE2O00115 360 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 S100A4P26447 101 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CD1CP29017 333 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CD70P32970 193 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ARR3P36575 388 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 WDR4P57081 412 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SELPLGQ14242 412 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF791Q3KP31 576 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 NXNL2Q5VZ03 156 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PLXDC2Q6UX71 529 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 LIPIQ6XZB0 460 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ADGRF3Q8IZF5 1079 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SUMF1Q8NBK3 374 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SLC30A7Q8NEW0 376 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM208Q9BTX3 173 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SLC12A9Q9BXP2 914 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF281Q9Y2X9 895 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 C3P01024 1663 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ICE1Q9Y2F5 2266 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 C10orf71Q711Q0 1435 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 KLF11O14901 512 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ORM1P02763 201 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SNRNP70P08621 437 aaKnown RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OMGP23515 440 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 HLA-DMAP28067 261 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 C21orf33P30042 268 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 HMGCLP35914 325 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SELENOWP63302 87 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 MFAP5Q13361 173 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PCK2Q16822 640 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 FAM162BQ5T6X4 162 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TANGO2Q6ICL3 276 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms