RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 UBQLNLQ8IYU4 475 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 CENPSQ8N2Z9 138 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 OR4C15Q8NGM1 316 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 SLC25A43Q8WUT9 341 aaPredicted RBP13□□□□□ -0.33
LINC00339-208ENST00000634934 ACOT11Q8WXI4 607 aaPredicted RBP13□□□□□ -0.33
LINC00339-208ENST00000634934 DDIT4LQ96D03 193 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 GPR137Q96N19 417 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 FKBP14Q9NWM8 211 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 SPRR3Q9UBC9 169 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 ENOPH1Q9UHY7 261 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 GMPPBQ9Y5P6 360 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 MED12Q93074 2177 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 FREM3P0C091 2139 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 FUOMA2VDF0 154 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 GJE1A6NN92 205 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 SEC14L5O43304 696 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 PIP5K1CO60331 668 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 CCNB2O95067 398 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 ACTL6AO96019 429 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 HNRNPCP07910 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC00339-208ENST00000634934 SHC1P29353 583 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 LIMS1P48059 325 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 BCAP31P51572 246 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 MAP2K6P52564 334 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 HMGA2P52926 109 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 LSM11P83369 360 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC00339-208ENST00000634934 IL5RAQ01344 420 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 SRYQ05066 204 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 C19orf57Q0VDD7 668 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 SPCS2Q15005 226 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 TBCEQ15813 527 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-208ENST00000634934 KRTCAP3Q53RY4 240 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 C1orf140Q5VVS0 124 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 C1QL3Q5VWW1 255 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 ZNF324BQ6AW86 544 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-208ENST00000634934 P2RY8Q86VZ1 359 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 HS3ST5Q8IZT8 346 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 C10orf53Q8N6V4 93 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 OR4K5Q8NGD3 323 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 PFN4Q8NHR9 129 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 DYNC2LI1Q8TCX1 351 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 STK35Q8TDR2 534 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 KTI12Q96EK9 354 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-208ENST00000634934 OR5B2Q96R09 309 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 TMEM43Q9BTV4 400 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 ZNF426Q9BUY5 554 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 WARS2Q9UGM6 360 aaKnown RBP12.99□□□□□ -0.33
LINC00339-208ENST00000634934 ITGB1BP2Q9UKP3 347 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 MED31Q9Y3C7 131 aa12.99□□□□□ -0.33
LINC00339-208ENST00000634934 A0A1B0GTH9 108 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 A0A1W2PNR3 127 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 PYCARD-AS1I3L0S3 204 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 EIF1AYO14602 144 aaKnown RBP12.98□□□□□ -0.33
LINC00339-208ENST00000634934 ZNHIT1O43257 154 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 OR10H3O60404 316 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 INMTO95050 263 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 FKBP2P26885 142 aaKnown RBP12.98□□□□□ -0.33
LINC00339-208ENST00000634934 RPS5P46782 204 aaKnown RBP12.98□□□□□ -0.33
LINC00339-208ENST00000634934 LHX2P50458 406 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 CLDN20P56880 219 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 EGR4Q05215 589 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 CRYZQ08257 329 aaKnown RBP12.98□□□□□ -0.33
LINC00339-208ENST00000634934 NPRL3Q12980 569 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 ANKDD1AQ495B1 522 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 VASNQ6EMK4 673 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 ARHGAP11AQ6P4F7 1023 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 MBOAT2Q6ZWT7 520 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 IGFN1Q86VF2 1251 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 NRMQ8IXM6 262 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 GHDCQ8N2G8 530 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 ARL5BQ96KC2 179 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 KLHL15Q96M94 604 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 BARD1Q99728 777 aaKnown RBP12.98□□□□□ -0.33
LINC00339-208ENST00000634934 FUZQ9BT04 418 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 ACOT13Q9NPJ3 140 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 MEPEQ9NQ76 525 aaPredicted RBP12.98□□□□□ -0.33
LINC00339-208ENST00000634934 KRT84Q9NSB2 600 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 ZNF407Q9C0G0 2248 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 TRAV36DV7A0A075B6V5 113 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 A0A1B0GVC2 190 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 H0YC42 278 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 AQP7O14520 342 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 TNFSF11O14788 317 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 AHSA1O95433 338 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 IFI30P13284 250 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 ANXA8P13928 327 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 CD40LGP29965 261 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 MYBPHQ13203 477 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 C3AR1Q16581 482 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 MICAQ29983 383 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 MEX3DQ86XN8 651 aaKnown RBP12.98□□□□□ -0.33
LINC00339-208ENST00000634934 RNF113BQ8IZP6 322 aaKnown RBP12.98□□□□□ -0.33
LINC00339-208ENST00000634934 MFSD4AQ8N468 514 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 MEIOBQ8N635 442 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 OR9Q2Q8NGE9 314 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 OR6Q1Q8NGQ2 317 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
LINC00339-208ENST00000634934 CPT1CQ8TCG5 803 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms