RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CABIN1Q9Y6J0 2220 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 TRIOO75962 3097 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 EML5Q05BV3 1969 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 IGLV3-12A0A075B6K2 115 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 A0A075B6Q4 140 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 A0A1B0GVG6 124 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF670-ZNF695F2Z2N8 137 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 GPX5O75715 221 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 OR7A10O76100 309 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 SLC2A10O95528 541 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 CER1O95813 267 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 S100A9P06702 114 aaKnown RBP6.53□□□□□ -1.36
BRCA1-230ENST00000634433 CYC1P08574 325 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 FUT1P19526 365 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 TUBG1P23258 451 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 GABRA5P31644 462 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 SOX3P41225 446 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 RORCP51449 518 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 PNLIPRP2P54317 469 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 NRG3P56975 720 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 CCL7P80098 99 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 BDH1Q02338 343 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF45Q02386 682 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 ITGADQ13349 1161 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 GPR50Q13585 617 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 EBPQ15125 230 aaKnown RBP6.53□□□□□ -1.36
BRCA1-230ENST00000634433 ISXQ2M1V0 245 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 RGS21Q2M5E4 152 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 SLC35F1Q5T1Q4 408 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 PRAMEF17Q5VTA0 474 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 LIPKQ5VXJ0 399 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 NIPAL3Q6P499 406 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 GUSBP11Q6P575 273 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 PAQR6Q6TCH4 344 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 IGFN1Q86VF2 1251 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 C3orf49Q96BT1 292 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 MRPL48Q96GC5 212 aaKnown RBP6.53□□□□□ -1.36
BRCA1-230ENST00000634433 GAL3ST4Q96RP7 486 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 C6orf62Q9GZU0 229 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-230ENST00000634433 WWTR1Q9GZV5 400 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 GAREM1Q9H706 876 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 TUBG2Q9NRH3 451 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 HAO2Q9NYQ3 351 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 RPH3AQ9Y2J0 694 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-230ENST00000634433 SLC6A5Q9Y345 797 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 CACNA1EQ15878 2313 aa6.53□□□□□ -1.36
BRCA1-230ENST00000634433 TRAV27A0A087WT01 109 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 J3QRK9 145 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ONECUT2O95948 504 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CFIP05156 583 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 LIMS3P0CW19 117 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 LIMS4P0CW20 117 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 GALP22466 123 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CPT2P23786 658 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF41P51814 821 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 NR0B1P51843 470 aaKnown RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 FXYD6P3P58550 94 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 RAC3P60763 192 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 RPS3AP61247 264 aaKnown RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 B2MP61769 119 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 RPS7P62081 194 aaKnown RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 DCDP81605 110 aaKnown RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 PLCXD2Q0VAA5 305 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CHAF1BQ13112 559 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 SKP2Q13309 424 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 NKAIN1Q4KMZ8 207 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 KLHL12Q53G59 568 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 LCN1P1Q5VSP4 162 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 THSD4Q6ZMP0 1018 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 LHFPL3Q86UP9 236 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 MISPQ8IVT2 679 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 C1orf210Q8IVY1 113 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 MFSD4AQ8N468 514 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 SLC37A3Q8NCC5 494 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 OR4F15Q8NGB8 312 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF563Q8TA94 476 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 KCNE4Q8WWG9 221 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 TP53INP1Q96A56 240 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 OR6C1Q96RD1 312 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ADOQ96SZ5 270 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 SPXQ9BT56 116 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CDADC1Q9BWV3 514 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 OCEL1Q9H607 264 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 MCCC2Q9HCC0 563 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 PPP1R14DQ9NXH3 145 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ATXN7L1Q9ULK2 861 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-230ENST00000634433 KCNK7Q9Y2U2 307 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 SEC16AO15027 2179 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 IGHV5-10-1A0A0J9YXX1 117 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 DAPL1A0PJW8 107 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 J3QRE1 110 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 TSPAN2O60636 221 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 ADAM11O75078 769 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 CBFA2T3O75081 653 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 SCRG1O75711 98 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 PPP1R3DO95685 299 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 IL1AP01583 271 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 HLA-DPB1P04440 258 aa6.52□□□□□ -1.37
BRCA1-230ENST00000634433 SYPP08247 313 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms