RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 DHRS1Q96LJ7 313 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 PIP5K1AQ99755 562 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 LRMDAQ9H2I8 198 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 MAGIXQ9H6Y5 334 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 NANSQ9NR45 359 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 B3GAT1Q9P2W7 334 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 ZNF229Q9UJW7 825 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 LOC102725191A0A1B0GVB3 256 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 A0A1W2PRQ8 180 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 HTR3EA5X5Y0 456 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 MRPL33O75394 65 aaKnown RBP17.99■□□□□ 0.47
PTCD3-220ENST00000627371 DIRAS1O95057 198 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 H1F0P07305 194 aaKnown RBP17.99■□□□□ 0.47
PTCD3-220ENST00000627371 COX6B1P14854 86 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 POU2F1P14859 743 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 EDNRAP25101 427 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 NTF4P34130 210 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 PMS2P3Q13401 168 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 DGCR6Q14129 220 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 EXOC3L2Q2M3D2 409 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 CREB3L2Q70SY1 520 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 ZDHHC21Q8IVQ6 265 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 KDM8Q8N371 416 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 ZIC4Q8N9L1 334 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 OR5J2Q8NH18 312 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 ACOT11Q8WXI4 607 aaPredicted RBP17.99■□□□□ 0.47
PTCD3-220ENST00000627371 APH1AQ96BI3 265 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 SGTBQ96EQ0 304 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 OXGR1Q96P68 337 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 ZNF385AQ96PM9 386 aaKnown RBP17.99■□□□□ 0.47
PTCD3-220ENST00000627371 SEPHS2Q99611 448 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 C20orf141Q9NUB4 165 aa17.99■□□□□ 0.47
PTCD3-220ENST00000627371 AQP12BA6NM10 295 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 MS4A18H0YCH9 400 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 PLPP3O14495 311 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 PIP5K1CO60331 668 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 OR7A10O76100 309 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 CNOT4O95628 575 aaKnown RBP17.98■□□□□ 0.47
PTCD3-220ENST00000627371 ASAH2BP0C7U1 165 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 ZNF43P17038 809 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 MAGEA2P43356 314 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 PUDPQ08623 228 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 FAM27E3Q08E93 113 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 MS4A18Q3C1V0 323 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 CASP12Q6UXS9 341 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 CCDC121Q6ZUS5 278 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.98■□□□□ 0.47
PTCD3-220ENST00000627371 PIWIL3Q7Z3Z3 882 aaKnown RBP17.98■□□□□ 0.47
PTCD3-220ENST00000627371 EPHX4Q8IUS5 362 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 AQP12AQ8IXF9 295 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 ZNF100Q8IYN0 542 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 RNF113BQ8IZP6 322 aaKnown RBP17.98■□□□□ 0.47
PTCD3-220ENST00000627371 SLC7A13Q8TCU3 470 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 LIPHQ8WWY8 451 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 ZNF347Q96SE7 839 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 MMADHCQ9H3L0 296 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-220ENST00000627371 FANCFQ9NPI8 374 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 PARPBPQ9NWS1 579 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 SLC7A8Q9UHI5 535 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 PRSS50Q9UI38 385 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 POMPQ9Y244 141 aa17.98■□□□□ 0.47
PTCD3-220ENST00000627371 A0A087WUU8 490 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 EBAG9O00559 213 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 HPRP00739 348 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 UMPSP11172 480 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 LSM11P83369 360 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTCD3-220ENST00000627371 IL1RL1Q01638 556 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 FLOT2Q14254 428 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 ZNF730Q6ZMV8 503 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 Q6ZT83 130 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 MBOAT2Q6ZWT7 520 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 NRMQ8IXM6 262 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 GABRG1Q8N1C3 465 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 LRRC17Q8N6Y2 441 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 SLC24A3Q9HC58 644 aa17.97■□□□□ 0.47
PTCD3-220ENST00000627371 ALPK2Q86TB3 2170 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 HNRNPRO43390 633 aaKnown RBP17.96■□□□□ 0.47
PTCD3-220ENST00000627371 HIST1H2ABP04908 130 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 ADORA3P0DMS8 318 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 IFI30P13284 250 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 FUT1P19526 365 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 CCKARP32238 428 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 UGT2B10P36537 528 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 SMIM11AP58511 58 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 SPIBQ01892 262 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 PRKCDQ05655 676 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 CHRNB3Q05901 458 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 SNTB1Q13884 538 aaKnown RBP17.96■□□□□ 0.47
PTCD3-220ENST00000627371 C1DQ13901 141 aaKnown RBP17.96■□□□□ 0.47
PTCD3-220ENST00000627371 FAM98BQ52LJ0 330 aaKnown RBP17.96■□□□□ 0.47
PTCD3-220ENST00000627371 FGD3Q5JSP0 725 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 ZNF787Q6DD87 383 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 PODNL1Q6PEZ8 512 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 HIST3H2AQ7L7L0 130 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 AAED1Q7RTV5 226 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 NANOGNBQ7Z5D8 188 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 UEVLDQ8IX04 471 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 HIST1H2ACQ93077 130 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 BPIFA2Q96DR5 249 aa17.96■□□□□ 0.47
PTCD3-220ENST00000627371 TESMINQ9Y4I5 508 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms