RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 IMPDH2P12268 514 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 PRG2P13727 222 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 HOXB9P17482 250 aaPredicted RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 GGT1P19440 569 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 KLK2P20151 261 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 HOXA5P20719 270 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 AQP1P29972 269 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 HOXC12P31275 282 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 CCKARP32238 428 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 SLC16A1P53985 500 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 RGS8P57771 180 aaPredicted RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 MTPNP58546 118 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 HOXC5Q00444 222 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 IL1RL1Q01638 556 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 GUCY1A3Q02108 690 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 TGFBR3Q03167 851 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 SF3A3Q12874 501 aaKnown RBP eCLIP5.65□□□□□ -1.5
TCF4-249ENST00000625716 PPA1Q15181 289 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 TESK1Q15569 626 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 TSC22D1Q15714 1073 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ACKR1Q16570 336 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ALG10BQ5I7T1 473 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 INTS11Q5TA45 600 aaKnown RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 C1orf140Q5VVS0 124 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 FBXW9Q5XUX1 488 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ULK3Q6PHR2 472 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 DHRS4L2Q6PKH6 230 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 PAQR6Q6TCH4 344 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 C5orf46Q6UWT4 87 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 DLEU7Q6UYE1 221 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 AAED1Q7RTV5 226 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ABHD12BQ7Z5M8 362 aaPredicted RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 PATL1Q86TB9 770 aaKnown RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 P2RY8Q86VZ1 359 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 P3H2Q8IVL5 708 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 TMEM99Q8N816 258 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ANKS4BQ8N8V4 417 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 PCYOX1LQ8NBM8 494 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 DNAJA4Q8WW22 397 aaPredicted RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 RASSF5Q8WWW0 418 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 C3orf49Q96BT1 292 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 MBD6Q96DN6 1003 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 SLC47A1Q96FL8 570 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ANKRD27Q96NW4 1050 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 CCL19Q99731 98 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ECSITQ9BQ95 431 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 CPPED1Q9BRF8 314 aaPredicted RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 SF3B5Q9BWJ5 86 aaKnown RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 PIF1Q9H611 641 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ZNF385DQ9H6B1 395 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 ZNF446Q9NWS9 450 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 GID8Q9NWU2 228 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 TESQ9UGI8 421 aaKnown RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 ING1Q9UK53 422 aaPredicted RBP5.65□□□□□ -1.5
TCF4-249ENST00000625716 RASD1Q9Y272 281 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 GMEB1Q9Y692 573 aa5.65□□□□□ -1.5
TCF4-249ENST00000625716 NUP214P35658 2090 aaPredicted RBP5.65□□□□□ -1.51
TCF4-249ENST00000625716 CELSR2Q9HCU4 2923 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 CENPEQ02224 2701 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 CREBBPQ92793 2442 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 PCNX3Q9H6A9 2034 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 LOC100653049A0A140TA62 436 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 OR6C65A6NJZ3 312 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 AQP7P3A6NL99 342 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 M0QX08 132 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 MRASO14807 208 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 CLOCKO15516 846 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 KLF4O43474 513 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 TPST1O60507 370 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 RAD51DO75771 328 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 KRT34O76011 436 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 NPPAP01160 153 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 IFNA14P01570 189 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 C8BP07358 591 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 CD99P14209 185 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 IGHV1-2P23083 117 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 ADSLP30566 484 aaPredicted RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 MDH1P40925 334 aaKnown RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 RPS5P46782 204 aaKnown RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 H3F3AP84243 136 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 FAPQ12884 760 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 KLF10Q13118 480 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 C1DQ13901 141 aaKnown RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 MFSD13AQ14CX5 517 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 TAB1Q15750 504 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 ADRM1Q16186 407 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 TRMT5Q32P41 509 aaKnown RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 COQ5Q5HYK3 327 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 TIMM23BQ5SRD1 257 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 FAM91A1Q658Y4 838 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 OR7E24Q6IFN5 339 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 NANOGP8Q6NSW7 305 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 KLHL17Q6TDP4 642 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 ZNF704Q6ZNC4 412 aaPredicted RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 NET1Q7Z628 596 aaPredicted RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 MED12LQ86YW9 2145 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 C10orf53Q8N6V4 93 aa5.64□□□□□ -1.51
TCF4-249ENST00000625716 ZNF433Q8N7K0 673 aaPredicted RBP5.64□□□□□ -1.51
TCF4-249ENST00000625716 LSMEM1Q8N8F7 131 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms