RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 FAM214BQ7L5A3 538 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 BTLAQ7Z6A9 289 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 GTF2IRD2Q86UP8 949 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 CDC20BQ86Y33 519 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 ZNF845Q96IR2 970 aaPredicted RBP11.3□□□□□ -0.6
PNKP-217ENST00000625216 ADGRG7Q96K78 797 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 MBOAT4Q96T53 435 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 RBM4BQ9BQ04 359 aaKnown RBP11.3□□□□□ -0.6
PNKP-217ENST00000625216 RBM4Q9BWF3 364 aaKnown RBP11.3□□□□□ -0.6
PNKP-217ENST00000625216 ANKRD19PQ9H560 264 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 GLRX2Q9NS18 164 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 SMPD3Q9NY59 655 aaPredicted RBP11.3□□□□□ -0.6
PNKP-217ENST00000625216 MCTS1Q9ULC4 181 aaKnown RBP11.3□□□□□ -0.6
PNKP-217ENST00000625216 SLC7A7Q9UM01 511 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 ICAM5Q9UMF0 924 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 LRRC42Q9Y546 428 aa11.3□□□□□ -0.6
PNKP-217ENST00000625216 A0A087WUU8 490 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 GJE1A6NN92 205 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 SHISA8B8ZZ34 492 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 PIP5K1CO60331 668 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 SYNGR4O95473 234 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 SNAP29O95721 258 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 CGAP01215 116 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 THRBP10828 461 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 IL11P20809 199 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 IGFBP5P24593 272 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 CD79BP40259 229 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 ARHGDIAP52565 204 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 GUSBP1Q15486 140 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 TAF11Q15544 211 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 C6orf52Q5T4I8 152 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 VWA1Q6PCB0 445 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 LSMEM1Q8N8F7 131 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 ATG16L2Q8NAA4 619 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 TOR1AIP2Q8NFQ8 470 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 OR4K5Q8NGD3 323 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 OR5W2Q8NH69 310 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 OR10D3Q8NH80 312 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 OR2V1Q8NHB1 315 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 POC1BQ8TC44 478 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 TMEM255BQ8WV15 326 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 GMPPAQ96IJ6 420 aaPredicted RBP11.29□□□□□ -0.6
PNKP-217ENST00000625216 FEVQ99581 238 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 NIPSNAP1Q9BPW8 284 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 TRIM2Q9C040 744 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 TMEM27Q9HBJ8 222 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 TIGARQ9NQ88 270 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 KIF17Q9P2E2 1029 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 ST6GALNAC2Q9UJ37 374 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 TMCC3Q9ULS5 477 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 EMC9Q9Y3B6 208 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 ANKRD17O75179 2603 aaKnown RBP11.29□□□□□ -0.6
PNKP-217ENST00000625216 DOCK7Q96N67 2140 aa11.29□□□□□ -0.6
PNKP-217ENST00000625216 A0A0J9YW62 118 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 CHP2O43745 196 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 AQP8O94778 261 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 NUDT14O95848 222 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 PLGP00747 810 aaPredicted RBP11.28□□□□□ -0.6
PNKP-217ENST00000625216 ACADSP16219 412 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 DNASE1P24855 282 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 IFNA8P32881 189 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 SLC6A8P48029 635 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 HSPA13P48723 471 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 UGT2B15P54855 530 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 CARD18P57730 90 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 SIRPAP78324 504 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 FAM27E3Q08E93 113 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 TOMM34Q15785 309 aaPredicted RBP11.28□□□□□ -0.6
PNKP-217ENST00000625216 CTU2Q2VPK5 515 aaKnown RBP11.28□□□□□ -0.6
PNKP-217ENST00000625216 ZIK1Q3SY52 487 aaPredicted RBP11.28□□□□□ -0.6
PNKP-217ENST00000625216 SLC25A53Q5H9E4 307 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 HBMQ6B0K9 141 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 PGBD2Q6P3X8 592 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
PNKP-217ENST00000625216 GALNT5Q7Z7M9 940 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 AQP11Q8NBQ7 271 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 OR6K3Q8NGY3 331 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 GPR119Q8TDV5 335 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 ACOT11Q8WXI4 607 aaPredicted RBP11.28□□□□□ -0.6
PNKP-217ENST00000625216 OSTF1Q92882 214 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 SLC38A4Q969I6 547 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 C3orf49Q96BT1 292 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 MRGPRX4Q96LA9 322 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 KLHL15Q96M94 604 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 FOXC2Q99958 501 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 ADI1Q9BV57 179 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 TOR3AQ9H497 397 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 FANCFQ9NPI8 374 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 PROCRQ9UNN8 238 aa11.28□□□□□ -0.6
PNKP-217ENST00000625216 KIAA1549Q9HCM3 1950 aa11.27□□□□□ -0.61
PNKP-217ENST00000625216 C16orf97H3BN30 126 aa11.27□□□□□ -0.61
PNKP-217ENST00000625216 ETV2O00321 342 aaPredicted RBP11.27□□□□□ -0.61
PNKP-217ENST00000625216 CXCL13O43927 109 aa11.27□□□□□ -0.61
PNKP-217ENST00000625216 OR10H3O60404 316 aa11.27□□□□□ -0.61
PNKP-217ENST00000625216 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.61
PNKP-217ENST00000625216 ADAP00813 363 aa11.27□□□□□ -0.61
PNKP-217ENST00000625216 ANXA8P13928 327 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms