RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 MAGEB1P43366 347 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 RAB13P51153 203 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 FAAP20Q6NZ36 180 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 FRRS1Q6ZNA5 592 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 ZAR1Q86SH2 424 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 OR4K14Q8NGD5 310 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 C2CD4CQ8TF44 421 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 NIT2Q9NQR4 276 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 MED17Q9NVC6 651 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 PFDN2Q9UHV9 154 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 DTX4Q9Y2E6 619 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 MEIKINA0A087WXM9 373 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 G3V3Q6 166 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 LPLP06858 475 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 CT62P0C5K7 136 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 VEGFCP49767 419 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 TRA2BP62995 288 aaKnown RBP12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 TMEM44Q2T9K0 475 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 TMEM64Q6YI46 380 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 ZNF836Q6ZNA1 936 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 NLRC3Q7RTR2 1065 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 LRRC25Q8N386 305 aaPredicted RBP12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 OR9A4Q8NGU2 314 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 ADAMTS14Q8WXS8 1223 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 CD180Q99467 661 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 USP36Q9P275 1121 aaKnown RBP12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 DAPP1Q9UN19 280 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 ZNF443Q9Y2A4 671 aaPredicted RBP12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 UNC13CQ8NB66 2214 aa12.3□□□□□ -0.44
PCDHB17P-202ENST00000623466 PLPP2O43688 288 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 SULT1A3P0DMM9 295 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 SULT1A4P0DMN0 295 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 SAGP10523 405 aaPredicted RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 TSPAN5P62079 268 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 ERVK-25P63136 954 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 MAT1AQ00266 395 aaKnown RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 CRMP1Q14194 572 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 PARGQ86W56 976 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 GID4Q8IVV7 300 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 OR52L1Q8NGH7 329 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 ZNF671Q8TAW3 534 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 KCTD12Q96CX2 325 aaKnown RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 PGLYRP3Q96LB9 341 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 DERL3Q96Q80 235 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 KIF25Q9UIL4 384 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 WDR45Q9Y484 360 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 OR6C65A6NJZ3 312 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 PRR23D1E9PI22 279 aaPredicted RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 HRKO00198 91 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 BHLHE40O14503 412 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 GATCO43716 136 aaKnown RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 RDH16O75452 317 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 PRR23D2P0DMB1 279 aaPredicted RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 HTR2AP28223 471 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 CAPZA1P52907 286 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 ARFIP1P53367 373 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 MAZP56270 477 aaKnown RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 KIAA1024LP59773 190 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 FOXK2Q01167 660 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 ZNF85Q03923 595 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 AVL9Q8NBF6 648 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 OR5T2Q8NGG2 359 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 NSMAFQ92636 917 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 GAL3ST3Q96A11 431 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 SCARF2Q96GP6 870 aaPredicted RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 PRSS27Q9BQR3 290 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 BIN3Q9NQY0 253 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 RCE1Q9Y256 329 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 HEBP2Q9Y5Z4 205 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 GXYLT2A0PJZ3 443 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 A6NCN8 305 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 B3GALT2O43825 422 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 EIF1BO60739 113 aaKnown RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 EIF3GO75821 320 aaKnown RBP eCLIP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 ALDOBP05062 364 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 IGHV4-34P06331 123 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 CTSEP14091 401 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 ST6GAL1P15907 406 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 POU3F2P20265 443 aaPredicted RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 GDNFP39905 211 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 EIF1P41567 113 aaKnown RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 CLDN12P56749 244 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 RPS15AP62244 130 aaKnown RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 HFEQ30201 348 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 MFSD12Q6NUT3 480 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 LINGO2Q7L985 606 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 GJD3Q8N144 294 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 OR4N2Q8NGD1 307 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 OR2T4Q8NH00 348 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 SMPDL3BQ92485 455 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 LRRC46Q96FV0 321 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 MRPL48Q96GC5 212 aaKnown RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 ZNF436Q9C0F3 470 aaPredicted RBP12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 C20orf85Q9H1P6 137 aa12.29□□□□□ -0.44
PCDHB17P-202ENST00000623466 LRRN3E7EW58 273 aa12.28□□□□□ -0.44
PCDHB17P-202ENST00000623466 UBL3O95164 117 aa12.28□□□□□ -0.44
PCDHB17P-202ENST00000623466 SBK2P0C263 348 aa12.28□□□□□ -0.44
PCDHB17P-202ENST00000623466 THEGLP0DJG4 465 aa12.28□□□□□ -0.44
PCDHB17P-202ENST00000623466 CPMP14384 443 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms