RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 CSF3P09919 207 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 LIMS3P0CW19 117 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 LIMS4P0CW20 117 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 RBMS1P29558 406 aaKnown RBP12.18□□□□□ -0.46
SIRPA-204ENST00000622179 PRSS3P35030 304 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 MELKQ14680 651 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 GPA33Q99795 319 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 NRIP3Q9NQ35 241 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 SCN5AQ14524 2016 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 TRBV11-1A0A0K0K1C0 115 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 ZNF749O43361 778 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 CCNOP22674 350 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 CRABP1P29762 137 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 NKPD1Q17RQ9 610 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 GPR139Q6DWJ6 353 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 CCDC190Q86UF4 302 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 OR5J2Q8NH18 312 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 SLC22A8Q8TCC7 542 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 BRIX1Q8TDN6 353 aaKnown RBP12.18□□□□□ -0.46
SIRPA-204ENST00000622179 FAM60AQ9NP50 221 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 RBM7Q9Y580 266 aaKnown RBP12.18□□□□□ -0.46
SIRPA-204ENST00000622179 BLACEA4D250 179 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 SEC14L5O43304 696 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 ZNF208O43345 1280 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 PLATP00750 562 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 ARSBP15848 533 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 ZNF43P17038 809 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 SPOCK1Q08629 439 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 GARNL3Q5VVW2 1013 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 FCRL6Q6DN72 434 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 PM20D2Q8IYS1 436 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 OR4C3Q8NH37 302 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 FAM46BQ96A09 425 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 DDIT4LQ96D03 193 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 SLC6A7Q99884 636 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 NUBP2Q9Y5Y2 271 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 SCN2AQ99250 2005 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 NPIPA2E9PIF3 369 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 NPIPA3F8WFD2 350 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 NSA2O95478 260 aaKnown RBP12.18□□□□□ -0.46
SIRPA-204ENST00000622179 CT62P0C5K7 136 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 CCR6P51684 374 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 SUN5Q8TC36 379 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 GIMAP5Q96F15 307 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 POTEKPQ9BYX7 375 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.18□□□□□ -0.46
SIRPA-204ENST00000622179 PRDM9Q9NQV7 894 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 FBXL4Q9UKA2 621 aa12.18□□□□□ -0.46
SIRPA-204ENST00000622179 CSTBP04080 98 aaKnown RBP12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SCRN3Q0VDG4 424 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 MRM1Q6IN84 353 aaKnown RBP12.17□□□□□ -0.46
SIRPA-204ENST00000622179 APOOLQ6UXV4 268 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 KIAA1958Q8N8K9 716 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 EVA1AQ9H8M9 152 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SRPK3Q9UPE1 567 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SPAG17Q6Q759 2223 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 KDM4BO94953 1096 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 AMY2AP04746 511 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 GDNFP39905 211 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 C14orf28Q4W4Y0 310 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 UEVLDQ8IX04 471 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SRRQ9GZT4 340 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 NXF5Q9H1B4 397 aaKnown RBP12.17□□□□□ -0.46
SIRPA-204ENST00000622179 POMT2Q9UKY4 750 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 VWA8A3KMH1 1905 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 PRAMEF25A6NGN4 478 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SYT7O43581 403 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SSX4O60224 188 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 GATBO75879 557 aaKnown RBP12.17□□□□□ -0.46
SIRPA-204ENST00000622179 CAPZBP47756 277 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 LIPNQ5VXI9 398 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SIAH3Q8IW03 269 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 NPRL2Q8WTW4 380 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SNAPC3Q92966 411 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 SLC25A44Q96H78 314 aaPredicted RBP12.17□□□□□ -0.46
SIRPA-204ENST00000622179 FAM71F1Q96KD3 344 aaPredicted RBP12.17□□□□□ -0.46
SIRPA-204ENST00000622179 LRRC61Q9BV99 259 aa12.17□□□□□ -0.46
SIRPA-204ENST00000622179 PTPRZ1P23471 2315 aaPredicted RBP12.17□□□□□ -0.46
SIRPA-204ENST00000622179 ATP1B1P05026 303 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 SRMP19623 302 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 PEBP1P30086 187 aaKnown RBP12.16□□□□□ -0.46
SIRPA-204ENST00000622179 FNTBP49356 437 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 DCAF7P61962 342 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 LTBQ06643 244 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 MEP1BQ16820 701 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 MORN4Q8NDC4 146 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 ARL6Q9H0F7 186 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 LHX9Q9NQ69 397 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 SLC6A5Q9Y345 797 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 TMED7-TICAM2A0A0A6YYA0 188 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 TMEM269A0A1B0GVZ9 245 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 DISC1C4P0D8 188 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 ACOT7O00154 380 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 SPI1P17947 270 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 SLC2A5P22732 501 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 SSTR2P30874 369 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 CD79BP40259 229 aa12.16□□□□□ -0.46
SIRPA-204ENST00000622179 RBM34P42696 430 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms